RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 APOBEC3AP31941 199 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-217ENST00000588230 LIMS1P48059 325 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 GIPRP48546 466 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 RAB1AP62820 205 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 ERVK-25P63136 954 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 YTHDF3Q7Z739 585 aaKnown RBP16.68■□□□□ 0.26
CIRBP-217ENST00000588230 IL17RDQ8NFM7 739 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 POP5Q969H6 163 aaKnown RBP16.68■□□□□ 0.26
CIRBP-217ENST00000588230 RSRC1Q96IZ7 334 aaKnown RBP16.68■□□□□ 0.26
CIRBP-217ENST00000588230 CLPTM1LQ96KA5 538 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 LRGUKQ96M69 825 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 TSPAN32Q96QS1 320 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 KCNK17Q96T54 332 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 FUZQ9BT04 418 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 DENND2DQ9H6A0 471 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-217ENST00000588230 SEC61A2Q9H9S3 476 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 SMURF2Q9HAU4 748 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 CBLN4Q9NTU7 201 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 GRHPRQ9UBQ7 328 aa16.68■□□□□ 0.26
CIRBP-217ENST00000588230 TLN2Q9Y4G6 2542 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 TCRBV5S2A0A599 114 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 UNC119BA6NIH7 251 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 OR10H3O60404 316 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 PTP4A3O75365 173 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 NDUFB2O95178 105 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 IFNGR2P38484 337 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 CDKN1AP38936 164 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 PTDSS1P48651 473 aaKnown RBP16.67■□□□□ 0.26
CIRBP-217ENST00000588230 ZNF133P52736 654 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-217ENST00000588230 CHRNB3Q05901 458 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 DNAL1Q4LDG9 190 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 THEM4Q5T1C6 240 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 C10orf128Q5T292 105 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 MYPOPQ86VE0 399 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-217ENST00000588230 ARIH2OSQ8N7S6 290 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 OR4F15Q8NGB8 312 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 FNDC8Q8TC99 324 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 NSMAFQ92636 917 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 NMD3Q96D46 503 aaKnown RBP16.67■□□□□ 0.26
CIRBP-217ENST00000588230 ASB9Q96DX5 294 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 SMR3AQ99954 134 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 SH3GL3Q99963 347 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 MAGIXQ9H6Y5 334 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 NOX3Q9HBY0 568 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 ZNF224Q9NZL3 707 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 SIGLEC7Q9Y286 467 aa16.67■□□□□ 0.26
CIRBP-217ENST00000588230 XKRYO14609 159 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 KRT36O76013 467 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 SLC2A10O95528 541 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 PATE4P0C8F1 98 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 ZNF26P17031 533 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-217ENST00000588230 CALCRP30988 508 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 FMODQ06828 376 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 NRN1LQ496H8 165 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 FAM98BQ52LJ0 330 aaKnown RBP16.66■□□□□ 0.26
CIRBP-217ENST00000588230 DPPA2Q7Z7J5 298 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 ZER1Q7Z7L7 766 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 CIARTQ8N365 385 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-217ENST00000588230 ZNF519Q8TB69 540 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 HTRA1Q92743 480 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 C18orf12Q96KH6 178 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 COX4I2Q96KJ9 171 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 Q96M85 177 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 Q96MF0 132 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 TRIM15Q9C019 465 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 RNF121Q9H920 327 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 FBXL3Q9UKT7 428 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 ADAM18Q9Y3Q7 739 aa16.66■□□□□ 0.26
CIRBP-217ENST00000588230 IGHV2OR16-5A0A0B4J2B6 119 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 MGRN1O60291 552 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 BMP4P12644 408 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 MRPS34P82930 218 aaKnown RBP16.65■□□□□ 0.26
CIRBP-217ENST00000588230 TRAP1Q12931 704 aaKnown RBP16.65■□□□□ 0.26
CIRBP-217ENST00000588230 SLC36A2Q495M3 483 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 TMEM53Q6P2H8 277 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 SLC25A47Q6Q0C1 308 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 VHLLQ6RSH7 139 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 SLC16A14Q7RTX9 510 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 CLDN22Q8N7P3 220 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 FGFBP3Q8TAT2 258 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 MS4A3Q96HJ5 214 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 ZNF570Q96NI8 536 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 KCNN2Q9H2S1 579 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 CA10Q9NS85 328 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 CSPG4Q6UVK1 2322 aa16.65■□□□□ 0.26
CIRBP-217ENST00000588230 VSTM5A8MXK1 200 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 TNFRSF11BO00300 401 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 INHBBP09529 407 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 ZNF14P17017 642 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-217ENST00000588230 NPR2P20594 1047 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 CDAP32320 146 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 GUCA1AP43080 201 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-217ENST00000588230 MAGEA2P43356 314 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 HGFACQ04756 655 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 RAB39AQ14964 217 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 SGCAQ16586 387 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 GPR139Q6DWJ6 353 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 SMARCD3Q6STE5 483 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 LRRC18Q8N456 261 aa16.64■□□□□ 0.25
CIRBP-217ENST00000588230 FBXO17Q96EF6 278 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms