RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, human

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-212	ENST00000588170	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.16	□□□□□ -0.3
GRN-212	ENST00000588170	SLC22A23	A1A5C7	686 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	SHISA9	B4DS77	424 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	SOCS2	O14508	198 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	CIB2	O75838	187 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	TP53	P04637	393 aa	Predicted RBP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	SCG5	P05408	212 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	CD79A	P11912	226 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	SDHA	P31040	664 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	CDKN2A	P42771	156 aa	Known RBP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	CAPZA2	P47755	286 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	THEM4	Q5T1C6	240 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	C10orf128	Q5T292	105 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	FAM205BP	Q63HN1	556 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	KLHL17	Q6TDP4	642 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	TMEM108	Q6UXF1	575 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	ZNF620	Q6ZNG0	422 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	PTCHD4	Q6ZW05	846 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	SSX8	Q7RTT4	187 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	CDH24	Q86UP0	819 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	OR8D4	Q8NGM9	314 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	ZNF75A	Q96N20	296 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	ERMAP	Q96PL5	475 aa	Predicted RBP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	RBP7	Q96R05	134 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	NIPSNAP1	Q9BPW8	284 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	ALG12	Q9BV10	488 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	IFT27	Q9BW83	186 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	DGCR6L	Q9BY27	220 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	OBP2B	Q9NPH6	170 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	STX18	Q9P2W9	335 aa	Known RBP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	DNAJB9	Q9UBS3	223 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	ST6GALNAC2	Q9UJ37	374 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.15	□□□□□ -0.3
GRN-212	ENST00000588170	DSCAM	O60469	2012 aa		13.15	□□□□□ -0.3
GRN-212	ENST00000588170	PRSS37	A4D1T9	235 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	TXNDC12	O95881	172 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	CBR1	P16152	277 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	HOXB6	P17509	224 aa	Known RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	PTAFR	P25105	342 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	SLC6A6	P31641	620 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	KRR1	Q13601	381 aa	Known RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	CLEC12A	Q5QGZ9	265 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	GPR139	Q6DWJ6	353 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	RASSF6	Q6ZTQ3	369 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	NABP1	Q96AH0	204 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	DUS3L	Q96G46	650 aa	Known RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	FOXN4	Q96NZ1	517 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	SLC38A2	Q96QD8	506 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	NDEL1	Q9GZM8	345 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	YY1AP1	Q9H869	796 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	ARMC1	Q9NVT9	282 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	PDP1	Q9P0J1	537 aa	Predicted RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	CRNN	Q9UBG3	495 aa	Predicted RBP	13.14	□□□□□ -0.31
GRN-212	ENST00000588170	MGAT4B	Q9UQ53	548 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	AP4S1	Q9Y587	144 aa		13.14	□□□□□ -0.31
GRN-212	ENST00000588170	XKRY	O14609	159 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	HS3ST1	O14792	307 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	E2F6	O75461	281 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	ATE1	O95260	518 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	SOX14	O95416	240 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	IGLV1-44	P01699	117 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	CECR9	P0C854	216 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	OR8G3P	P0DMU2	310 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	HIST1H1C	P16403	213 aa	Known RBP	13.13	□□□□□ -0.31
GRN-212	ENST00000588170	CD53	P19397	219 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	ZNF84	P51523	738 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	RPS6KA3	P51812	740 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	KPNB1	Q14974	876 aa	Known RBP	13.13	□□□□□ -0.31
GRN-212	ENST00000588170	SGCA	Q16586	387 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	ZNF672	Q499Z4	452 aa	Predicted RBP	13.13	□□□□□ -0.31
GRN-212	ENST00000588170	SLC35F1	Q5T1Q4	408 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	C1QTNF12	Q5T7M4	302 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	OTP	Q5XKR4	325 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	SLC22A25	Q6T423	547 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	PAMR1	Q6UXH9	720 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	B3GLCT	Q6Y288	498 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	AMIGO2	Q86SJ2	522 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	CCDC36	Q8IYA8	594 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	LRRC18	Q8N456	261 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	LRTOMT	Q8WZ04	291 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	MS4A3	Q96HJ5	214 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	SMURF2	Q9HAU4	748 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	IL20	Q9NYY1	176 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	REV1	Q9UBZ9	1251 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	MOK	Q9UQ07	419 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	CDH10	Q9Y6N8	788 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170	CELSR1	Q9NYQ6	3014 aa		13.13	□□□□□ -0.31
GRN-212	ENST00000588170		E7EQL1	145 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	DCTN6	O00399	190 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	ARPC3	O15145	178 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	IGKV3-15	P01624	115 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	APEH	P13798	732 aa	Known RBP	13.12	□□□□□ -0.31
GRN-212	ENST00000588170	CTLA4	P16410	223 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	CALCR	P30988	508 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	GIPR	P48546	466 aa		13.12	□□□□□ -0.31
GRN-212	ENST00000588170	PTDSS1	P48651	473 aa	Known RBP	13.12	□□□□□ -0.31
GRN-212	ENST00000588170	IDH3G	P51553	393 aa	Predicted RBP	13.12	□□□□□ -0.31
GRN-212	ENST00000588170	RAB1A	P62820	205 aa		13.12	□□□□□ -0.31

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