RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 ZNF627Q7L945 461 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 DPPA2Q7Z7J5 298 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 SVOPLQ8N434 492 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 OR5K1Q8NHB7 308 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 NSMAFQ92636 917 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 BCL2L2Q92843 193 aaPredicted RBP10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 TMEM38BQ9NVV0 291 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 POU2F3Q9UKI9 436 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 RNF115Q9Y4L5 304 aa10.4□□□□□ -0.74
SDHDP1-201ENST00000588055 ARPC3O15145 178 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 MGRN1O60291 552 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 TXNDC12O95881 172 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 PRF1P14222 555 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 CRABP1P29762 137 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 ARR3P36575 388 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 FXYD6P3P58550 94 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 BSPH1Q075Z2 132 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 NPRL3Q12980 569 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 GSG1Q2KHT4 349 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC36A3Q495N2 470 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 TMEM53Q6P2H8 277 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 LEG1Q6P5S2 330 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 LRFN4Q6PJG9 635 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC16A14Q7RTX9 510 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 WDFY1Q8IWB7 410 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC22A24Q8N4F4 322 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 LRTOMTQ8WZ04 291 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 CENPNQ96H22 339 aaPredicted RBP10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 RADILQ96JH8 1075 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 NIPSNAP1Q9BPW8 284 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 TSSK6Q9BXA6 273 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 PRRG3Q9BZD7 231 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 SYT4Q9H2B2 425 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 RERGLQ9H628 205 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 SEC61A2Q9H9S3 476 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 CCNB1IP1Q9NPC3 277 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 PAPOLBQ9NRJ5 636 aaKnown RBP10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 IL20Q9NYY1 176 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 CENPEQ02224 2701 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 NBPF19A0A087WUL8 3843 aa10.39□□□□□ -0.75
SDHDP1-201ENST00000588055 DCHS2Q6V1P9 2916 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC22A23A1A5C7 686 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 RIIAD1A6NNX1 92 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ABCD4O14678 606 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ZNF3P17036 446 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 POU1F1P28069 291 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 PTDSS1P48651 473 aaKnown RBP10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ZNF133P52736 654 aaPredicted RBP10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 TUBA1BP68363 451 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 TUBA4AP68366 448 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 MRPS34P82930 218 aaKnown RBP10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 NCMAPQ5T1S8 102 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ADAM5Q6NVV9 412 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC27A4Q6P1M0 643 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC22A25Q6T423 547 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ZNF704Q6ZNC4 412 aaPredicted RBP10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 C22orf34Q6ZV56 151 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 TUBA1AQ71U36 451 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 AMIGO2Q86SJ2 522 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 CDC20BQ86Y33 519 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 HS3ST5Q8IZT8 346 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 WDR31Q8NA23 367 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ICA1LQ8NDH6 482 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SDR9C7Q8NEX9 313 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC38A2Q96QD8 506 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SNX18Q96RF0 628 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 OSBPL10Q9BXB5 764 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 C1QTNF6Q9BXI9 259 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 PLA2G12AQ9BZM1 189 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 SEMA6AQ9H2E6 1030 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 NELFAQ9H3P2 528 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 RNF121Q9H920 327 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 KLHL21Q9UJP4 597 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 POLR1DQ9Y2S0 133 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 ORC6Q9Y5N6 252 aa10.38□□□□□ -0.75
SDHDP1-201ENST00000588055 FAM221AA4D161 298 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 BHLHE40O14503 412 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 SIAH2O43255 324 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 SLC16A7O60669 478 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 KHDRBS3O75525 346 aaKnown RBP10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 HLA-HP01893 362 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 CRYAAP02489 173 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 OSMP13725 252 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 HIST1H1CP16403 213 aaKnown RBP10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 MSR1P21757 451 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 CD40P25942 277 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 CENPAP49450 140 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 CDH11P55287 796 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 PCBD1P61457 104 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 HSF2Q03933 536 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 GLO1Q04760 184 aa10.37□□□□□ -0.75
SDHDP1-201ENST00000588055 PLP2Q04941 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms