RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SMARCD3Q6STE5 483 aa8.79□□□□□ -1
TPM4-207ENST00000588032 DPY19L2P2Q6ZN68 376 aa8.79□□□□□ -1
TPM4-207ENST00000588032 TUBA1AQ71U36 451 aa8.79□□□□□ -1
TPM4-207ENST00000588032 ZER1Q7Z7L7 766 aa8.79□□□□□ -1
TPM4-207ENST00000588032 MEX3DQ86XN8 651 aaKnown RBP8.79□□□□□ -1
TPM4-207ENST00000588032 TGIF2LYQ8IUE0 185 aa8.79□□□□□ -1
TPM4-207ENST00000588032 LURAP1LQ8IV03 231 aa8.79□□□□□ -1
TPM4-207ENST00000588032 SKA3Q8IX90 412 aa8.79□□□□□ -1
TPM4-207ENST00000588032 ZNF519Q8TB69 540 aa8.79□□□□□ -1
TPM4-207ENST00000588032 GNPDA2Q8TDQ7 276 aa8.79□□□□□ -1
TPM4-207ENST00000588032 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
TPM4-207ENST00000588032 CLPTM1LQ96KA5 538 aa8.79□□□□□ -1
TPM4-207ENST00000588032 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
TPM4-207ENST00000588032 TRAF4Q9BUZ4 470 aaPredicted RBP8.79□□□□□ -1
TPM4-207ENST00000588032 MMADHCQ9H3L0 296 aaPredicted RBP8.79□□□□□ -1
TPM4-207ENST00000588032 SIAEQ9HAT2 523 aa8.79□□□□□ -1
TPM4-207ENST00000588032 NRIP3Q9NQ35 241 aa8.79□□□□□ -1
TPM4-207ENST00000588032 CBLN4Q9NTU7 201 aa8.79□□□□□ -1
TPM4-207ENST00000588032 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
TPM4-207ENST00000588032 SPEF1Q9Y4P9 236 aa8.79□□□□□ -1
TPM4-207ENST00000588032 LYVE1Q9Y5Y7 322 aa8.79□□□□□ -1
TPM4-207ENST00000588032 CENPEQ02224 2701 aa8.79□□□□□ -1
TPM4-207ENST00000588032 CREBBPQ92793 2442 aa8.79□□□□□ -1
TPM4-207ENST00000588032 RAI1Q7Z5J4 1906 aaPredicted RBP8.78□□□□□ -1
TPM4-207ENST00000588032 ATP6V1G2-DDX39BF2Z307 99 aa8.78□□□□□ -1
TPM4-207ENST00000588032 IMPA2O14732 288 aa8.78□□□□□ -1
TPM4-207ENST00000588032 GSC2O15499 205 aa8.78□□□□□ -1
TPM4-207ENST00000588032 IDH3BO43837 385 aa8.78□□□□□ -1
TPM4-207ENST00000588032 SERPINA5P05154 406 aa8.78□□□□□ -1
TPM4-207ENST00000588032 SOD3P08294 240 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ZNF26P17031 533 aaPredicted RBP8.78□□□□□ -1
TPM4-207ENST00000588032 SDHAP31040 664 aa8.78□□□□□ -1
TPM4-207ENST00000588032 SLC6A6P31641 620 aa8.78□□□□□ -1
TPM4-207ENST00000588032 GIPRP48546 466 aa8.78□□□□□ -1
TPM4-207ENST00000588032 GSSP48637 474 aa8.78□□□□□ -1
TPM4-207ENST00000588032 PTDSS1P48651 473 aaKnown RBP8.78□□□□□ -1
TPM4-207ENST00000588032 PTH2RP49190 550 aa8.78□□□□□ -1
TPM4-207ENST00000588032 FABP6P51161 128 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ERVK-25P63136 954 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ADAM8P78325 824 aa8.78□□□□□ -1
TPM4-207ENST00000588032 MYBPC1Q00872 1141 aa8.78□□□□□ -1
TPM4-207ENST00000588032 PIGFQ07326 219 aa8.78□□□□□ -1
TPM4-207ENST00000588032 SPOCK1Q08629 439 aa8.78□□□□□ -1
TPM4-207ENST00000588032 NPRL3Q12980 569 aa8.78□□□□□ -1
TPM4-207ENST00000588032 TSPAN31Q12999 210 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ETFDHQ16134 617 aa8.78□□□□□ -1
TPM4-207ENST00000588032 RFX4Q33E94 735 aa8.78□□□□□ -1
TPM4-207ENST00000588032 FAM27BQ5VT28 67 aa8.78□□□□□ -1
TPM4-207ENST00000588032 OR2T5Q6IEZ7 315 aa8.78□□□□□ -1
TPM4-207ENST00000588032 RPL13AP3Q6NVV1 102 aa8.78□□□□□ -1
TPM4-207ENST00000588032 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
TPM4-207ENST00000588032 SLC16A14Q7RTX9 510 aa8.78□□□□□ -1
TPM4-207ENST00000588032 FAM122BQ7Z309 247 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ADCK1Q86TW2 530 aa8.78□□□□□ -1
TPM4-207ENST00000588032 IGFN1Q86VF2 1251 aa8.78□□□□□ -1
TPM4-207ENST00000588032 MUC15Q8N387 334 aa8.78□□□□□ -1
TPM4-207ENST00000588032 NUP37Q8NFH4 326 aa8.78□□□□□ -1
TPM4-207ENST00000588032 OR2T29Q8NH02 315 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ZNF75AQ96N20 296 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ZNF570Q96NI8 536 aa8.78□□□□□ -1
TPM4-207ENST00000588032 WACQ9BTA9 647 aa8.78□□□□□ -1
TPM4-207ENST00000588032 CHID1Q9BWS9 393 aa8.78□□□□□ -1
TPM4-207ENST00000588032 C1orf198Q9H425 327 aa8.78□□□□□ -1
TPM4-207ENST00000588032 YY1AP1Q9H869 796 aa8.78□□□□□ -1
TPM4-207ENST00000588032 REEP1Q9H902 201 aa8.78□□□□□ -1
TPM4-207ENST00000588032 RNF121Q9H920 327 aa8.78□□□□□ -1
TPM4-207ENST00000588032 ZNF224Q9NZL3 707 aa8.78□□□□□ -1
TPM4-207ENST00000588032 PDZD2O15018 2839 aa8.78□□□□□ -1
TPM4-207ENST00000588032 MAST4O15021 2626 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 DHRS12A0PJE2 317 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PRSS37A4D1T9 235 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 ZNF503-AS2A6NEH8 195 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 ARPC3O15145 178 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 CCNB2O95067 398 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 SLC2A10O95528 541 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 TXNDC12O95881 172 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 CD8AP01732 235 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 ZNF14P17017 642 aaPredicted RBP8.77□□□□□ -1.01
TPM4-207ENST00000588032 ATP5J2P56134 94 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PCBD1P61457 104 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PLP2Q04941 152 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 FLOT2Q14254 428 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 MICAQ29983 383 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PGBD2Q6P3X8 592 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 B3GLCTQ6Y288 498 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 OR4C15Q8NGM1 316 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 OR1J2Q8NGS2 313 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 NSMAFQ92636 917 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PERPQ96FX8 193 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 Q96M85 177 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 GPA33Q99795 319 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 SH3GL3Q99963 347 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 CADM1Q9BY67 442 aaKnown RBP8.77□□□□□ -1.01
TPM4-207ENST00000588032 LRMDAQ9H2I8 198 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 OR52D1Q9H346 318 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 ZNF442Q9H7R0 627 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 BARX1Q9HBU1 254 aaPredicted RBP8.77□□□□□ -1.01
TPM4-207ENST00000588032 CCNB1IP1Q9NPC3 277 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 CA10Q9NS85 328 aa8.77□□□□□ -1.01
TPM4-207ENST00000588032 PLA2G2EQ9NZK7 142 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms