RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MT-ND5P03915 603 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 PGA3P0DJD8 388 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 ERVS71-1P61550 626 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 PLP2Q04941 152 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 HIST3H3Q16695 136 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 DUSP7Q16829 419 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 TTC33Q6PID6 262 aaPredicted RBP11.97□□□□□ -0.49
DNMT1-213ENST00000587604 USP51Q70EK9 711 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 LRRC17Q8N6Y2 441 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 NANPQ8TBE9 248 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 TIMD4Q96H15 378 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 ARHGDIGQ99819 225 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 SLCO1B3Q9NPD5 702 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 ANGPT4Q9Y264 503 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 WIPI2Q9Y4P8 454 aa11.97□□□□□ -0.49
DNMT1-213ENST00000587604 CLDN25C9JDP6 229 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 M0QX08 132 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 TPD52L2O43399 206 aaKnown RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 ZNF500O60304 480 aaPredicted RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 IGHV3-13P01766 116 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 IGHV2-5P01817 119 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 IGHG1P01857 330 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 THY1P04216 161 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 HIST1H2ABP04908 130 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 ASAH2BP0C7U1 165 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 DRD4P21917 467 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 GATA3P23771 443 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 PCBP3P57721 371 aaKnown RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 MAGOHP61326 146 aaKnown RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 MELKQ14680 651 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 NPTX1Q15818 432 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 HFEQ30201 348 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 DCAF12L2Q5VW00 463 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 HIST3H2AQ7L7L0 130 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 RBM15BQ8NDT2 890 aaKnown RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 OR6T1Q8NGN1 323 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 ADAMTS16Q8TE57 1224 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 RAB1CQ92928 201 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 HIST1H2ACQ93077 130 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 MCHR2Q969V1 340 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 SLC19A3Q9BZV2 496 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 SAP30LQ9HAJ7 183 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.96□□□□□ -0.49
DNMT1-213ENST00000587604 ZNF229Q9UJW7 825 aa11.96□□□□□ -0.49
DNMT1-213ENST00000587604 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
DNMT1-213ENST00000587604 CENPBD1B2RD01 187 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 LYPD3O95274 346 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ADRA2CP18825 462 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 IDH3AP50213 366 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF84P51523 738 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 CLRN1P58418 232 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 TSTQ16762 297 aaKnown RBP11.95□□□□□ -0.5
DNMT1-213ENST00000587604 AWAT1Q58HT5 328 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 RUNDC3AQ59EK9 446 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 FAM209AQ5JX71 171 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 DLEU7Q6UYE1 221 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ICA1LQ8NDH6 482 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 GPR32P1Q8NGA4 272 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ELMOD3Q96FG2 381 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 MPP4Q96JB8 637 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 C7orf26Q96N11 449 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 SLC6A7Q99884 636 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 CPPED1Q9BRF8 314 aaPredicted RBP11.95□□□□□ -0.5
DNMT1-213ENST00000587604 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 MRPL13Q9BYD1 178 aaKnown RBP11.95□□□□□ -0.5
DNMT1-213ENST00000587604 C7orf69Q9H7B7 122 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 CACNG2Q9Y698 323 aa11.95□□□□□ -0.5
DNMT1-213ENST00000587604 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 TRAPPC13A5PLN9 417 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
DNMT1-213ENST00000587604 ERLIN1O75477 346 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 FPR2P25090 351 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 APLNRP35414 380 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF81P51508 661 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF718Q3SXZ3 478 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 AGKQ53H12 422 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 TREML1Q86YW5 311 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 RBM45Q8IUH3 476 aaKnown RBP11.94□□□□□ -0.5
DNMT1-213ENST00000587604 LRRC18Q8N456 261 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
DNMT1-213ENST00000587604 CCL17Q92583 94 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 GTF3AQ92664 365 aaKnown RBP11.94□□□□□ -0.5
DNMT1-213ENST00000587604 TLCD1Q96CP7 247 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 SEPHS2Q99611 448 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 EBF4Q9BQW3 602 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 KCNN2Q9H2S1 579 aa11.94□□□□□ -0.5
DNMT1-213ENST00000587604 SIAEQ9HAT2 523 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms