RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SLC22A20A6NK97 555 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 B4DXG7 233 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 H3BSA7 217 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 J3QLW9 94 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 K7ENP7 123 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 SMAD9O15198 467 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 TRAF3IP2O43734 574 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 EFNA2O43921 213 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 SELENOFO60613 162 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 CYTIPO60759 359 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 MRPL33O75394 65 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 GABARAPO95166 117 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 FARS2O95363 451 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 HRGP04196 525 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 HLA-DPB1P04440 258 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ITGB2P05107 769 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ADRB1P08588 477 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 PGA4P0DJD7 388 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 PGA3P0DJD8 388 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 HLA-DOBP13765 273 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 CPEP16870 476 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZNF708P17019 499 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZNF19P17023 458 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 WT1P19544 449 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 MYL9P24844 172 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 MAPK3P27361 379 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 LAP3P28838 519 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 HSD11B1P28845 292 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 SHC1P29353 583 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 GABRA5P31644 462 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 STARP49675 285 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 RGS6P49758 472 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 LHX2P50458 406 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ETV1P50549 477 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 AGFG1P52594 562 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 RIDAP52758 137 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 CLDN20P56880 219 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 B3GALT5-AS1P59052 145 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 CXADRP78310 365 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 RUNX1T1Q06455 604 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ACSM1Q08AH1 577 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 TAF13Q15543 124 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 DGUOKQ16854 277 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 CNPY1Q3B7I2 92 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZNF829Q3KNS6 432 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 OR2G6Q5TZ20 316 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 LIPKQ5VXJ0 399 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 VASNQ6EMK4 673 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 INO80CQ6PI98 192 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 KLHL24Q6TFL4 600 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZNF322Q6U7Q0 402 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 GDPGP1Q6ZNW5 385 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 AAED1Q7RTV5 226 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 GGNQ86UU5 652 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 KLBQ86Z14 1044 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 EGFL6Q8IUX8 553 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 GLB1L2Q8IW92 636 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 THEM6Q8WUY1 208 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 SPRYD4Q8WW59 207 aaPredicted RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 GATAD2BQ8WXI9 593 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 NSMAFQ92636 917 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 PTP4A1Q93096 173 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 TMIGD2Q96BF3 282 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZNF524Q96C55 264 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 C12orf43Q96C57 262 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 C4orf36Q96KX1 117 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 EMC6Q9BV81 110 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 TTTY10Q9BZA0 68 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 DEFB127Q9H1M4 99 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 ZDHHC11Q9H8X9 412 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 GLRX2Q9NS18 164 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 NDUFB11Q9NX14 153 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 GLTPQ9NZD2 209 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 UPB1Q9UBR1 384 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 GTF2A1LQ9UNN4 478 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 B9D1Q9UPM9 204 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 NOSIPQ9Y314 301 aaKnown RBP5.52□□□□□ -1.53
LIG3-206ENST00000586058 CEPT1Q9Y6K0 416 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 EP300Q09472 2414 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 PNMA8CA0A1B0GUJ8 204 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 A0A1W2PQL4 384 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TMEM8BA6NDV4 472 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 TVP23AA6NH52 213 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 METTL15A6NJ78 407 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 FIGNL2A6NMB9 653 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 FAM171A2A8MVW0 826 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZNF587BE7ETH6 402 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 H3BMQ9 156 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 AQP7O14520 342 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 GPRIN2O60269 458 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 SULT1C4O75897 302 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 RGS9O75916 674 aaPredicted RBP5.51□□□□□ -1.53
LIG3-206ENST00000586058 AQP8O94778 261 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 ZNF432O94892 652 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 IGHG3P01860 377 aa5.51□□□□□ -1.53
LIG3-206ENST00000586058 APOC1P02654 83 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms