RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 MCHR2Q969V1 340 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 SEPHS2Q99611 448 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 ZNF426Q9BUY5 554 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 BCL2L14Q9BZR8 327 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 C1orf198Q9H425 327 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 RNF121Q9H920 327 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 SLCO1B3Q9NPD5 702 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 NANSQ9NR45 359 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 SLC13A4Q9UKG4 626 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 CORO2BQ9UQ03 480 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
SDF2-202ENST00000585428 MEGF8Q7Z7M0 2845 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 A0A0G2JMP0 313 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 A0A0X1KG70 313 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 EVPLLA8MZ36 301 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 M0R3H8 397 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 RNF13O43567 381 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
SDF2-202ENST00000585428 LCKP06239 509 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 GATA3P23771 443 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 STX1BP61266 288 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 MAGOHP61326 146 aaKnown RBP12.3□□□□□ -0.44
SDF2-202ENST00000585428 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 SLC36A2Q495M3 483 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 TTC33Q6PID6 262 aaPredicted RBP12.3□□□□□ -0.44
SDF2-202ENST00000585428 SLC16A14Q7RTX9 510 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 TSPYL5Q86VY4 417 aaPredicted RBP12.3□□□□□ -0.44
SDF2-202ENST00000585428 RBM45Q8IUH3 476 aaKnown RBP12.3□□□□□ -0.44
SDF2-202ENST00000585428 OR4M2Q8NGB6 313 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 TLCD1Q96CP7 247 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 RAB39BQ96DA2 213 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 SUCNR1Q9BXA5 334 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 DECR2Q9NUI1 292 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 NKIRAS1Q9NYS0 192 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 OPN4Q9UHM6 478 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 ZNF229Q9UJW7 825 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 CACNG2Q9Y698 323 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 DYSFO75923 2080 aa12.3□□□□□ -0.44
SDF2-202ENST00000585428 BCL10O95999 233 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 FSHBP01225 129 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 ADRA2CP18825 462 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 MMP15P51511 669 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 ZNF133P52736 654 aaPredicted RBP12.29□□□□□ -0.44
SDF2-202ENST00000585428 PLP2Q04941 152 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 MELKQ14680 651 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 HFEQ30201 348 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 DCAF12L2Q5VW00 463 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 USP51Q70EK9 711 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 ADAMTS16Q8TE57 1224 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 GTF3AQ92664 365 aaKnown RBP12.29□□□□□ -0.44
SDF2-202ENST00000585428 RAB1CQ92928 201 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 DVL3Q92997 716 aaPredicted RBP12.29□□□□□ -0.44
SDF2-202ENST00000585428 EBF4Q9BQW3 602 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 CPPED1Q9BRF8 314 aaPredicted RBP12.29□□□□□ -0.44
SDF2-202ENST00000585428 CCDC28BQ9BUN5 200 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 SLC19A3Q9BZV2 496 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 PCDHAC1Q9H158 963 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 LRMDAQ9H2I8 198 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 KLHL21Q9UJP4 597 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
SDF2-202ENST00000585428 IQCMA0A1B0GVH7 501 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 TRAPPC13A5PLN9 417 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 CPSF4LA6NMK7 179 aaKnown RBP12.28□□□□□ -0.44
SDF2-202ENST00000585428 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 CLDN25C9JDP6 229 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 KCNAB3O43448 404 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 IGHG1P01857 330 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 TSTQ16762 297 aaKnown RBP12.28□□□□□ -0.44
SDF2-202ENST00000585428 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 TMEM255AQ5JRV8 349 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 FAM209AQ5JX71 171 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 RBM15BQ8NDT2 890 aaKnown RBP12.28□□□□□ -0.44
SDF2-202ENST00000585428 OR1J1Q8NGS3 322 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
SDF2-202ENST00000585428 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 POM121L2Q96KW2 1035 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 C7orf26Q96N11 449 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 PRSS27Q9BQR3 290 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 C7orf69Q9H7B7 122 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 SIAEQ9HAT2 523 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
SDF2-202ENST00000585428 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
SDF2-202ENST00000585428 PPIAL4EA0A075B759 164 aa12.27□□□□□ -0.45
SDF2-202ENST00000585428 PPIAL4CA0A0B4J2A2 164 aa12.27□□□□□ -0.45
SDF2-202ENST00000585428 PPIAL4DF5H284 164 aa12.27□□□□□ -0.45
SDF2-202ENST00000585428 BLOC1S5-TXNDC5H3BN57 136 aa12.27□□□□□ -0.45
SDF2-202ENST00000585428 POLR3GO15318 223 aaPredicted RBP12.27□□□□□ -0.45
SDF2-202ENST00000585428 UBOX5O94941 541 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms