RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RAD52P43351 418 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 KRTAP10-3P60369 221 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 RPS23P62266 143 aaKnown RBP15.32■□□□□ 0.04
TOP3A-220ENST00000585031 HOXC5Q00444 222 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 GALK2Q01415 458 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 NFYCQ13952 458 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 MS4A18Q3C1V0 323 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 TMEM255AQ5JRV8 349 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 SAMD4BQ5PRF9 694 aaKnown RBP15.32■□□□□ 0.04
TOP3A-220ENST00000585031 ARPINQ7Z6K5 226 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF417Q8TAU3 575 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 TMIGD2Q96BF3 282 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 TXNDC15Q96J42 360 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF587Q96SQ5 575 aaPredicted RBP15.32■□□□□ 0.04
TOP3A-220ENST00000585031 GPA33Q99795 319 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 DCLRE1BQ9H816 532 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 PLEK2Q9NYT0 353 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 ADA2Q9NZK5 511 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 AHSA1O95433 338 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 IL6P05231 212 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF250P15622 560 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 MAKP20794 623 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 CBLP22681 906 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 ACTR3P61158 418 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 C1DQ13901 141 aaKnown RBP15.31■□□□□ 0.04
TOP3A-220ENST00000585031 SPRNQ5BIV9 151 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 SPANXN4Q5MJ08 99 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 RGS7BPQ6MZT1 257 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-220ENST00000585031 TMEM154Q6P9G4 183 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 SERPINA11Q86U17 422 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 C1QL4Q86Z23 238 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF440Q8IYI8 595 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 SLC25A28Q96A46 364 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 RSPO3Q9BXY4 272 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-220ENST00000585031 OR51B6Q9H340 312 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 RNPEPL1Q9HAU8 725 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 NKIRAS2Q9NYR9 191 aa15.31■□□□□ 0.04
TOP3A-220ENST00000585031 CLDN25C9JDP6 229 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 FKBP6O75344 327 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 GRPRP30550 384 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 CDKN2CP42773 168 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 TSTQ16762 297 aaKnown RBP15.3■□□□□ 0.04
TOP3A-220ENST00000585031 DPY19L1Q2PZI1 675 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 RETREG3Q86VR2 466 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 SKA3Q8IX90 412 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 DPP10Q8N608 796 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 KIR3DL3Q8N743 410 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 OR52P1PQ8NH57 321 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 PNPT1Q8TCS8 783 aaKnown RBP15.3■□□□□ 0.04
TOP3A-220ENST00000585031 WFDC12Q8WWY7 111 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 POP5Q969H6 163 aaKnown RBP15.3■□□□□ 0.04
TOP3A-220ENST00000585031 CCDC124Q96CT7 223 aaKnown RBP15.3■□□□□ 0.04
TOP3A-220ENST00000585031 TEX37Q96LM6 180 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 GAL3ST1Q99999 423 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 DCAF16Q9NXF7 216 aa15.3■□□□□ 0.04
TOP3A-220ENST00000585031 PPIAL4EA0A075B759 164 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PPIAL4CA0A0B4J2A2 164 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 ENTPD5O75356 428 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PPIAL4FP0DN26 164 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 NR2F1P10589 423 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 IL12AP29459 219 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PCGF2P35227 344 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 KLF3P57682 345 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-220ENST00000585031 GNA13Q14344 377 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PCGF3Q3KNV8 242 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 ARMCX4Q5H9R4 360 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 C8orf82Q6P1X6 216 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-220ENST00000585031 MSANTD1Q6ZTZ1 278 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 DHDDSQ86SQ9 333 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 SYNPRQ8TBG9 265 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 RMND5AQ9H871 391 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 UBAP1Q9NZ09 502 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 PURGQ9UJV8 347 aaKnown RBP15.29■□□□□ 0.04
TOP3A-220ENST00000585031 POMPQ9Y244 141 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF443Q9Y2A4 671 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-220ENST00000585031 POFUT2Q9Y2G5 429 aa15.29■□□□□ 0.04
TOP3A-220ENST00000585031 IGKV1D-42A0A075B6H8 117 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 A0A096LPI6 279 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 MDFIC2A0A1B0GVS7 189 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 RAB36O95755 333 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 SERPINA5P05154 406 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 S100A3P33764 101 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 SLC7A2P52569 658 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 SEC61A1P61619 476 aaKnown RBP15.28■□□□□ 0.04
TOP3A-220ENST00000585031 COPZ1P61923 177 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 GLO1Q04760 184 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF154Q13106 437 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 CAMK2DQ13557 499 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 ANXA8L1Q5VT79 327 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 WDR88Q6ZMY6 472 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 H1FNTQ75WM6 255 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-220ENST00000585031 PEX5LQ8IYB4 626 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 CCL17Q92583 94 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 RAB1CQ92928 201 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 VPS33AQ96AX1 596 aa15.28■□□□□ 0.04
TOP3A-220ENST00000585031 TESCQ96BS2 214 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms