RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PTGR1Q14914 329 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MS4A18Q3C1V0 323 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 LSM12Q3MHD2 195 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 SPATA46Q5T0L3 261 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 THEM4Q5T1C6 240 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MRPL2Q5T653 305 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 TNFAIP8L2Q6P589 184 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 KLBQ86Z14 1044 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC22A9Q8IVM8 553 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 ZNF101Q8IZC7 436 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CLECL1Q8IZS7 167 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 KRTCAP2Q8N6L1 136 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CCNYL1Q8N7R7 359 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CPEB3Q8NE35 698 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 PNPT1Q8TCS8 783 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 C10orf82Q8WW14 230 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 XAGE5Q8WWM1 108 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 THOC1Q96FV9 657 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 TXNDC15Q96J42 360 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 LRR1Q96L50 414 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MECRQ9BV79 373 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 BCL2L14Q9BZR8 327 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC38A1Q9H2H9 487 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 NANOGQ9H9S0 305 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CDH20Q9HBT6 801 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MSL2Q9HCI7 577 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 ACOXLQ9NUZ1 547 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 EXD2Q9NVH0 621 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 RLIMQ9NVW2 624 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 FBLN5Q9UBX5 448 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 GIMAP2Q9UG22 337 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 RNF103-CHMP3A0A140T963 221 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 LOC102725191A0A1B0GVB3 256 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 C22orf46C9J442 243 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 CFLARO15519 480 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 RAD51CO43502 376 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 ZNF205O95201 554 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 AHSA1O95433 338 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 INHBAP08476 426 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 PRG2P13727 222 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 TCP1P17987 556 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 UQCRC2P22695 453 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 WNT5AP41221 380 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 TNFAIP6P98066 277 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 CDK5R2Q13319 367 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 C1DQ13901 141 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 SYPL1Q16563 259 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 NSUN5P1Q3KNT7 163 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 GALNTL6Q49A17 601 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 KLHL22Q53GT1 634 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 MBNL2Q5VZF2 373 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 WBP2NLQ6ICG8 309 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 WDR88Q6ZMY6 472 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 FRMD7Q6ZUT3 714 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 CADM2Q8N3J6 435 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC22A24Q8N4F4 322 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 ANKFN1Q8N957 763 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC25A40Q8TBP6 338 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 STK35Q8TDR2 534 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 PAFAH2Q99487 392 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 SH3GL3Q99963 347 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 PCGF1Q9BSM1 259 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 FUT8Q9BYC5 575 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 ULBP2Q9BZM5 246 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 PPCSQ9HAB8 311 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 NINJ2Q9NZG7 142 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 NKX1-2Q9UD57 310 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 ZDHHC8Q9ULC8 765 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 TMED5Q9Y3A6 229 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 USH1CQ9Y6N9 552 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 U3KQK5 164 aa6.34□□□□□ -1.39
SMARCE1-217ENST00000580654 IGHV1-69DA0A0B4J2H0 117 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 PLSCR5A0PG75 271 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 CDHR4A6H8M9 788 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 POC1B-GALNT4F8VUJ3 575 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 G3V2L1 256 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TMEM178BH3BS89 294 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 P2RY10O00398 339 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 AIM2O14862 343 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 AKAP8O43823 692 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 CRCPO75575 148 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 IGHV1-69P01742 117 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 LINC00032P0C843 101 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC6A2P23975 617 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 GRPRP30550 384 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 MSX2P35548 267 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TGFBR2P37173 567 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 SERPINB9P50453 376 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TBC1D28Q2M2D7 210 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF718Q3SXZ3 478 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 GPAT3Q53EU6 434 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 TTMPQ5BVD1 217 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ATAD3BQ5T9A4 648 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ATG16L1Q676U5 607 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC27A4Q6P1M0 643 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 PGBD2Q6P3X8 592 aa6.33□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF841Q6ZN19 808 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms