RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NRN1LQ496H8 165 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 TIMM23BQ5SRD1 257 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 HMBOX1Q6NT76 420 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 FAHD1Q6P587 224 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 BHLHA15Q7RTS1 189 aaPredicted RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 ADCK1Q86TW2 530 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 MEX3DQ86XN8 651 aaKnown RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 ARIH2OSQ8N7S6 290 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 NOXO1Q8NFA2 376 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 OR52L1Q8NGH7 329 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 MAGEE2Q8TD90 523 aaPredicted RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 LRTOMTQ8WZ04 291 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 PIK3IP1Q96FE7 263 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 MUS81Q96NY9 551 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 ALKBH3Q96Q83 286 aaPredicted RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 TSPAN32Q96QS1 320 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 KCNK17Q96T54 332 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 EMC6Q9BV81 110 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 KATNB1Q9BVA0 655 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 RNPEPL1Q9HAU8 725 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 MOV10Q9HCE1 1003 aaKnown RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 S100A14Q9HCY8 104 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 OBP2BQ9NPH6 170 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 GLTPQ9NZD2 209 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 GRHPRQ9UBQ7 328 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 ZNF346Q9UL40 294 aaKnown RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 BAIAP2Q9UQB8 552 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 HEATR1Q9H583 2144 aaKnown RBP8.68□□□□□ -1.02
GGA3-209ENST00000580646 PRR14LQ5THK1 2151 aa8.68□□□□□ -1.02
GGA3-209ENST00000580646 ZNF99A8MXY4 864 aaPredicted RBP8.67□□□□□ -1.02
GGA3-209ENST00000580646 TRMUO75648 421 aaKnown RBP8.67□□□□□ -1.02
GGA3-209ENST00000580646 SERPINI2O75830 405 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 IGHV3-9P01782 118 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 TP53P04637 393 aaPredicted RBP8.67□□□□□ -1.02
GGA3-209ENST00000580646 CD53P19397 219 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 IL32P24001 234 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ACVR1BP36896 505 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 CLRN1P58418 232 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 CAMK2DQ13557 499 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 MELKQ14680 651 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 GABRA6Q16445 453 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 THEM4Q5T1C6 240 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 C10orf128Q5T292 105 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 MED13LQ71F56 2210 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 LINGO2Q7L985 606 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ANKRD13BQ86YJ7 626 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 TGIF2LYQ8IUE0 185 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ZDHHC13Q8IUH4 622 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 NAV3Q8IVL0 2385 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 WDFY1Q8IWB7 410 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 CCDC36Q8IYA8 594 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 PARP8Q8N3A8 854 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 OR6N1Q8NGY5 312 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 HSD17B8Q92506 261 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 HDAC2Q92769 488 aaKnown RBP8.67□□□□□ -1.02
GGA3-209ENST00000580646 STMN2Q93045 179 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 NMD3Q96D46 503 aaKnown RBP8.67□□□□□ -1.02
GGA3-209ENST00000580646 NIPSNAP1Q9BPW8 284 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ULBP2Q9BZM5 246 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ACTR6Q9GZN1 396 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ZNF556Q9HAH1 456 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 GPR35Q9HC97 309 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 REV1Q9UBZ9 1251 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 ENOPH1Q9UHY7 261 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 POFUT2Q9Y2G5 429 aa8.67□□□□□ -1.02
GGA3-209ENST00000580646 SMIM31A0A1B0GVY4 71 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 CIB4A0PJX0 185 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 OR5H1A6NKK0 313 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 M0R3G1 203 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 BHLHE40O14503 412 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 XKRYO14609 159 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 LYZL6O75951 148 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 OSMP13725 252 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 CD99P14209 185 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 ZNF23P17027 643 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 LOXP28300 417 aaPredicted RBP8.66□□□□□ -1.02
GGA3-209ENST00000580646 ESRRGP62508 458 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 ERVK-25P63136 954 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 RUNX1T1Q06455 604 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 KRR1Q13601 381 aaKnown RBP8.66□□□□□ -1.02
GGA3-209ENST00000580646 CEACAM16Q2WEN9 425 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 MESTQ5EB52 335 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 BEX5Q5H9J7 111 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 PHYHD1Q5SRE7 291 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 ANKRD16Q6P6B7 361 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 KLHL17Q6TDP4 642 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 IGFN1Q86VF2 1251 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 HS3ST5Q8IZT8 346 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 LNX2Q8N448 690 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 ATG16L2Q8NAA4 619 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 MCHR2Q969V1 340 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 GTPBP3Q969Y2 492 aaKnown RBP8.66□□□□□ -1.02
GGA3-209ENST00000580646 S100PBPQ96BU1 408 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 SAMD8Q96LT4 415 aa8.66□□□□□ -1.02
GGA3-209ENST00000580646 Q96M85 177 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms