RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CTXN1P60606 82 aa21.56■■□□□ 1.04
CDC42EP4-205ENST00000580315 RPL27P61353 136 aaKnown RBP21.56■■□□□ 1.04
CDC42EP4-205ENST00000580315 PIGFQ07326 219 aa21.56■■□□□ 1.04
CDC42EP4-205ENST00000580315 OR13C2Q8NGS9 318 aa21.56■■□□□ 1.04
CDC42EP4-205ENST00000580315 CACNG6Q9BXT2 260 aa21.56■■□□□ 1.04
CDC42EP4-205ENST00000580315 VSTM5A8MXK1 200 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 DIRAS1O95057 198 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 IGHMP01871 453 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 SEMG1P04279 462 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 FABP3P05413 133 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 RPL4P36578 427 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 ACVR1BP36896 505 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 PTDSS1P48651 473 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 RAB1AP62820 205 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 MYBPC1Q00872 1141 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 NRN1LQ496H8 165 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 C11orf71Q6IPW1 123 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 DPPA2Q7Z7J5 298 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 FNDC8Q8TC99 324 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 FAM46AQ96IP4 442 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 ALG12Q9BV10 488 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 SEC61A2Q9H9S3 476 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 SMURF2Q9HAU4 748 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 CA10Q9NS85 328 aa21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 ZNF346Q9UL40 294 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-205ENST00000580315 IGHV2OR16-5A0A0B4J2B6 119 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 A6NIZ1 184 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 TP53P04637 393 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 CALCRP30988 508 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 GIPRP48546 466 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 RAP1BP61224 184 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 RAP1AP62834 184 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 CD47Q08722 323 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 ZBED5Q49AG3 693 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 C10orf128Q5T292 105 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 IGFN1Q86VF2 1251 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 SKA3Q8IX90 412 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 LRRC75AQ8NAA5 344 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 NUP37Q8NFH4 326 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 OR52J3Q8NH60 311 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 BCAS4Q8TDM0 211 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 HDAC2Q92769 488 aaKnown RBP21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 DHRS1Q96LJ7 313 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 RBP7Q96R05 134 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 MUC13Q9H3R2 512 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 ACTR3BQ9P1U1 418 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 AURKCQ9UQB9 309 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 PMF1-BGLAPU3KQ54 211 aa21.54■■□□□ 1.04
CDC42EP4-205ENST00000580315 TRBV4-1A0A0J9YWV2 114 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 CDC42EP2O14613 210 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 MGRN1O60291 552 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 GADD45GO95257 159 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 IGHV4-39P01824 125 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 ZNF133P52736 654 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 SPIBQ01892 262 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 MTX3Q5HYI7 312 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 RINLQ6ZS11 566 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 MYPOPQ86VE0 399 aaPredicted RBP21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 OR4K5Q8NGD3 323 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 FBXO17Q96EF6 278 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 KCNK17Q96T54 332 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 NOX3Q9HBY0 568 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 ZNF224Q9NZL3 707 aa21.53■■□□□ 1.04
CDC42EP4-205ENST00000580315 TLX2O43763 284 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 PDE5AO76074 875 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 ZNF14P17017 642 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 SERPINF1P36955 418 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 FHL1Q13642 323 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 RAB35Q15286 201 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 SLC36A2Q495M3 483 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 IQCCQ4KMZ1 466 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 THEM4Q5T1C6 240 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 TMEM53Q6P2H8 277 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 VHLLQ6RSH7 139 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 CYP2R1Q6VVX0 501 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 DNM1P46Q6ZS02 220 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 SLC16A14Q7RTX9 510 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 TSPAN32Q96QS1 320 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 SH3GL3Q99963 347 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 RNF121Q9H920 327 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 IL1RAPQ9NPH3 570 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 GRHPRQ9UBQ7 328 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 PRPF19Q9UMS4 504 aaKnown RBP21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 SPEF1Q9Y4P9 236 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 CUBNO60494 3623 aa21.52■■□□□ 1.04
CDC42EP4-205ENST00000580315 H7C417 338 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 CD5LO43866 347 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 NDUFS7O75251 213 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 SLC2A10O95528 541 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 CD14P08571 375 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 T-ENOLP0DO92 83 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 SNRPD2P62316 118 aaKnown RBP21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 HGFACQ04756 655 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 ARIH2OSQ8N7S6 290 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 MS4A3Q96HJ5 214 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 KCNN2Q9H2S1 579 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 ZNF442Q9H7R0 627 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 YAE1D1Q9NRH1 226 aa21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 GDF2Q9UK05 429 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP4-205ENST00000580315 TMCC3Q9ULS5 477 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms