RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ELAC2Q9BQ52 826 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 WFDC6Q9BQY6 131 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 EMC6Q9BV81 110 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 NOX3Q9HBY0 568 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 GPR35Q9HC97 309 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SDR39U1Q9NRG7 319 aaPredicted RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 CA10Q9NS85 328 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SLC25A37Q9NYZ2 338 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 CALML5Q9NZT1 146 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 B3GAT1Q9P2W7 334 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 RABL2AQ9UBK7 228 aaPredicted RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 RASD1Q9Y272 281 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 YLPM1P49750 1951 aaKnown RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 ARPC4-TTLL3A0A0A6YYG9 625 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 A0A1B0GWA3 101 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 TMEM129A0AVI4 362 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 B9A039 149 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 LRRN3E7EW58 273 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 SLCO1B7G3V0H7 640 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 LYNX1G3V0Z9 82 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 MS4A18H0YCH9 400 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 J3KRW8 73 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 M0R3G1 203 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 TPST2O60704 377 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 ZNF432O94892 652 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 VAMP5O95183 116 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 IGLV1-44P01699 117 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 CRYAAP02489 173 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 LYNX1P0DP58 116 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 APEHP13798 732 aaKnown RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 CBR1P16152 277 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 ZNF43P17038 809 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 BTF3P20290 206 aaKnown RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 GTF2E2P29084 291 aaKnown RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 IL2RGP31785 369 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 CAPZA2P47755 286 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 AQP5P55064 265 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 NPRL3Q12980 569 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 C1DQ13901 141 aaKnown RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 CEACAM16Q2WEN9 425 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 MS4A18Q3C1V0 323 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 IQCCQ4KMZ1 466 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 PAGE3Q5JUK9 113 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 FAM120AOSQ5T036 256 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 ARMC4Q5T2S8 1044 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 EPGNQ6UW88 154 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 SPATA21Q7Z572 469 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 ABHD12BQ7Z5M8 362 aaPredicted RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 MDP1Q86V88 176 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 TLCD1Q96CP7 247 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 TXNDC15Q96J42 360 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 LRGUKQ96M69 825 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 OXGR1Q96P68 337 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 OR2M2Q96R28 347 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 DOK1Q99704 481 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 KCNS3Q9BQ31 491 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 EBF4Q9BQW3 602 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 PIMREGQ9BSJ6 248 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 KATNB1Q9BVA0 655 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 LINC00470Q9BZP3 86 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 BPESC1Q9GZL8 116 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 SHARPINQ9H0F6 387 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 PLK3Q9H4B4 646 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 IKZF5Q9H5V7 419 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 RMND5AQ9H871 391 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 TMBIM4Q9HC24 238 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 CRLF2Q9HC73 371 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 MSL2Q9HCI7 577 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 BCL2L10Q9HD36 194 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 A4GALTQ9NPC4 353 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 OBP2BQ9NPH6 170 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 NKIRAS1Q9NYS0 192 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 CRNNQ9UBG3 495 aaPredicted RBP5.37□□□□□ -1.55
NUP88-212ENST00000576708 RPS6KB2Q9UBS0 482 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 IFT52Q9Y366 437 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 FKBP7Q9Y680 259 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 USH1CQ9Y6N9 552 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 COL6A5A8TX70 2615 aa5.37□□□□□ -1.55
NUP88-212ENST00000576708 ATRQ13535 2644 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 A0A096LPI6 279 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 IGHV2OR16-5A0A0B4J2B6 119 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 LOC390937A0A1W2PQ73 354 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 OR6C65A6NJZ3 312 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 C5orf58C9J3I9 102 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 RPL36A-HNRNPH2H7BZ11 118 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 hCG_2039718K7EN88 272 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TRAF3IP2O43734 574 aaPredicted RBP5.36□□□□□ -1.55
NUP88-212ENST00000576708 SLC43A1O75387 559 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 SERPINI2O75830 405 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 STAMBPO95630 424 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 TGFAP01135 160 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 IGKV3-15P01624 115 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 HLA-HP01893 362 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 BGLAPP02818 100 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 AMY1AP04745 511 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 CSF3P09919 207 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 PATE4P0C8F1 98 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 RAP2AP10114 183 aa5.36□□□□□ -1.55
NUP88-212ENST00000576708 DAOP14920 347 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms