RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ISOC2Q96AB3 205 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 CMKLR1Q99788 373 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 GAREM1Q9H706 876 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 MRM2Q9UI43 246 aaKnown RBP13.21□□□□□ -0.29
SCARF1-209ENST00000576012 LAMP5Q9UJQ1 280 aa13.21□□□□□ -0.29
SCARF1-209ENST00000576012 RNF222A6NCQ9 220 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 FGF17O60258 216 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 EIF4E2O60573 245 aaKnown RBP13.21□□□□□ -0.3
SCARF1-209ENST00000576012 SMCO1Q147U7 214 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 DMRTC1Q5HYR2 192 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 SLC29A4Q7RTT9 530 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 CHST4Q8NCG5 386 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 NPEPL1Q8NDH3 523 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 GLYATL2Q8WU03 294 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 DCUN1D4Q92564 292 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 PIGMQ9H3S5 423 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 CHRNA9Q9UGM1 479 aa13.21□□□□□ -0.3
SCARF1-209ENST00000576012 RPH3AQ9Y2J0 694 aaPredicted RBP13.21□□□□□ -0.3
SCARF1-209ENST00000576012 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.3
SCARF1-209ENST00000576012 A0A1B0GV50 99 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 YKT6O15498 198 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 SULT1B1O43704 296 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PVRP15151 417 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 CXADRP78310 365 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 ARHGAP19Q14CB8 494 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 FCRL6Q6DN72 434 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 UNQ9370/PRO34162Q6UXP9 181 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 INTS12Q96CB8 462 aaKnown RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 AMELYQ99218 206 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 BCL2L14Q9BZR8 327 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 THSD7BQ9C0I4 1608 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 BCL2L11O43521 198 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PI3P19957 117 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PEBP1P30086 187 aaKnown RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 CASRP41180 1078 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 AIMP2Q13155 320 aaKnown RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 DHCR24Q15392 516 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 ATPAF1Q5TC12 328 aaPredicted RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PRAMEF8Q5VWM4 474 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PRAMEF7Q5VXH5 474 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 FAM174AQ8TBP5 190 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 PHOSPHO1Q8TCT1 267 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
SCARF1-209ENST00000576012 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
SCARF1-209ENST00000576012 CHD9Q3L8U1 2897 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 A0A0D9SG52 128 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 MEX3AA1L020 520 aaKnown RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 P2RX6O15547 441 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 GNRH1P01148 92 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 EPCAMP16422 314 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ITGB8P26012 769 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ADAM8P78325 824 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ELAVL1Q15717 326 aaKnown RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ARMC10Q8N2F6 343 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 BHLHE23Q8NDY6 225 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 FAM117AQ9C073 453 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 TMED7Q9Y3B3 224 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 OTOL1A6NHN0 477 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 GPRIN2O60269 458 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CYB5AP00167 134 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CSF2RAP15509 400 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ADH6P28332 368 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 P2RY2P41231 377 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 PNLIPRP2P54317 469 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 SPOCK1Q08629 439 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 ZIC1Q15915 447 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 C21orf62-AS1Q17RA5 79 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 PLPP4Q5VZY2 271 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 VN1R4Q7Z5H5 301 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 LCN9Q8WX39 176 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CCDC74AQ96AQ1 378 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CNTNAP3BQ96NU0 1288 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 KXD1Q9BQD3 176 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CHRDQ9H2X0 955 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 KLF2Q9Y5W3 355 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-209ENST00000576012 C11orf98E9PRG8 122 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 HRKO00198 91 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 CALCBP10092 127 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 AGTR1P30556 359 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 LSSP48449 732 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 IL13RA1P78552 427 aa13.19□□□□□ -0.3
SCARF1-209ENST00000576012 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms