RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SLC2A10O95528 541 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 CCKARP32238 428 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 POLR2IP36954 125 aaKnown RBP15.02□□□□□ -0.01
NUP88-210ENST00000574867 FOXG1P55316 489 aaPredicted RBP15.02□□□□□ -0.01
NUP88-210ENST00000574867 CRMP1Q14194 572 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 NRN1LQ496H8 165 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 C9orf135Q5VTT2 229 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 ZNF627Q7L945 461 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 BHLHA15Q7RTS1 189 aaPredicted RBP15.02□□□□□ -0.01
NUP88-210ENST00000574867 OR1K1Q8NGR3 316 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 NRG4Q8WWG1 115 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 HRASLS5Q96KN8 279 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 FOXB1Q99853 325 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 RACGAP1Q9H0H5 632 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 RPRD1BQ9NQG5 326 aaKnown RBP15.02□□□□□ -0.01
NUP88-210ENST00000574867 TVP23BQ9NYZ1 205 aa15.02□□□□□ -0.01
NUP88-210ENST00000574867 OR6C68A6NDL8 312 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 RAD51DO75771 328 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 PPP3CBP16298 524 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 CTLA4P16410 223 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 CDC42P60953 191 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 SNAPC1Q16533 368 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 C1QTNF12Q5T7M4 302 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ANKRD16Q6P6B7 361 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ZNF837Q96EG3 531 aaPredicted RBP15.01□□□□□ -0.01
NUP88-210ENST00000574867 DDOQ99489 341 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 PITX2Q99697 317 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 NUAK2Q9H093 628 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 FN3KQ9H479 309 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 NPDC1Q9NQX5 325 aaPredicted RBP15.01□□□□□ -0.01
NUP88-210ENST00000574867 FKBP7Q9Y680 259 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 TENM4Q6N022 2769 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 E9PQ18 207 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 H0YJX3 145 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 DLGAP1O14490 977 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 SLC16A7O60669 478 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 KHDRBS3O75525 346 aaKnown RBP15.01□□□□□ -0.01
NUP88-210ENST00000574867 HOXC12P31275 282 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 PTDSS1P48651 473 aaKnown RBP15.01□□□□□ -0.01
NUP88-210ENST00000574867 SLC25A1P53007 311 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ARF1P84077 181 aaKnown RBP15.01□□□□□ -0.01
NUP88-210ENST00000574867 GABRA6Q16445 453 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ZBTB46Q86UZ6 589 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 CYB561A3Q8NBI2 242 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ZNF555Q8NEP9 628 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 OR2T4Q8NH00 348 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 NSMAFQ92636 917 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 ACTR6Q9GZN1 396 aa15.01□□□□□ -0.01
NUP88-210ENST00000574867 IGKV1D-43A0A0B4J1Z2 117 aa15□□□□□ -0.01
NUP88-210ENST00000574867 GRNP28799 593 aaKnown RBP15□□□□□ -0.01
NUP88-210ENST00000574867 GGT2P36268 569 aa15□□□□□ -0.01
NUP88-210ENST00000574867 MRPS34P82930 218 aaKnown RBP15□□□□□ -0.01
NUP88-210ENST00000574867 SSX8Q7RTT4 187 aa15□□□□□ -0.01
NUP88-210ENST00000574867 P2RY8Q86VZ1 359 aa15□□□□□ -0.01
NUP88-210ENST00000574867 MUS81Q96NY9 551 aa15□□□□□ -0.01
NUP88-210ENST00000574867 NMNAT2Q9BZQ4 307 aa15□□□□□ -0.01
NUP88-210ENST00000574867 TMEM38BQ9NVV0 291 aa15□□□□□ -0.01
NUP88-210ENST00000574867 FAM118AQ9NWS6 357 aa15□□□□□ -0.01
NUP88-210ENST00000574867 NDRG4Q9ULP0 352 aaKnown RBP15□□□□□ -0.01
NUP88-210ENST00000574867 PRR23D1E9PI22 279 aaPredicted RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 SLC16A6O15403 523 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 PRR23D2P0DMB1 279 aaPredicted RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 NPR2P20594 1047 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 GUCA1AP43080 201 aaPredicted RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 KEAP1Q14145 624 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 ZNF813Q6ZN06 617 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 FOXL2NBQ6ZUU3 175 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 S100PBPQ96BU1 408 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 UGT2A1Q9Y4X1 527 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 GMPPBQ9Y5P6 360 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 IGLV1-36A0A0B4J1U3 117 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 LOC100130705A0A1B0GUX0 176 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 OR5H1A6NKK0 313 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 PRSS44E7EML9 344 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 FARS2O95363 451 aaKnown RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 HOXB1P14653 301 aaPredicted RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 B4GALT1P15291 398 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 GLO1Q04760 184 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 TSC22D1Q15714 1073 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 TIMM23BQ5SRD1 257 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 FBXW10Q5XX13 1052 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 GLB1L2Q8IW92 636 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 CCDC36Q8IYA8 594 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 OR6V1Q8N148 313 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 FAM81AQ8TBF8 368 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 TMEM163Q8TC26 289 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 BCL2L2Q92843 193 aaPredicted RBP14.99□□□□□ -0.01
NUP88-210ENST00000574867 TSSK2Q96PF2 358 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 RERGLQ9H628 205 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 OBP2BQ9NPH6 170 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 IMPAD1Q9NX62 359 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 B9D1Q9UPM9 204 aa14.99□□□□□ -0.01
NUP88-210ENST00000574867 GCN1Q92616 2671 aaKnown RBP14.98□□□□□ -0.01
NUP88-210ENST00000574867 A0A1W2PPL8 197 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 PRKYO43930 277 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 IGFBP2P18065 325 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 CENPAP49450 140 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 TBRG1Q3YBR2 411 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 TTC23Q5W5X9 447 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms