RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 STPG2Q8N412 459 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 C19orf47Q8N9M1 422 aaKnown RBP17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TSEN15Q8WW01 171 aaKnown RBP17.25■□□□□ 0.35
SCARF1-206ENST00000573852 ST8SIA4Q92187 359 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 PPP1R14AQ96A00 147 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 FOXN4Q96NZ1 517 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 MED11Q9P086 117 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 PFDN2Q9UHV9 154 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TDRD6O60522 2096 aaKnown RBP17.25■□□□□ 0.35
SCARF1-206ENST00000573852 CLDN4O14493 209 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 LINC01565O15544 149 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 HPGDP15428 266 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 CCKBRP32239 447 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 TPMTP51580 245 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 RASGEF1BQ0VAM2 473 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 EMC4Q5J8M3 183 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF660Q6AZW8 331 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-206ENST00000573852 ASPHD2Q6ICH7 369 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 PARGQ86W56 976 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 STK35Q8TDR2 534 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 FAM3DQ96BQ1 224 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 APMAPQ9HDC9 416 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 UBQLN4Q9NRR5 601 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 CDV3Q9UKY7 258 aaKnown RBP17.24■□□□□ 0.35
SCARF1-206ENST00000573852 GMFGO60234 142 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 RENP00797 406 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 AKT2P31751 481 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 PRSS3P35030 304 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 ARMC6Q6NXE6 501 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 TAF8Q7Z7C8 310 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF321PQ8N8H1 164 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 CLEC1AQ8NC01 280 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 OR1S1Q8NH92 325 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 SLC22A13Q9Y226 551 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 KIR2DS5A0A0G2JLQ3 304 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 A0A0G2JNG1 304 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 KIR2DS3K7RE56 304 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 FGF2P09038 288 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 TACR3P29371 465 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 SORDQ00796 357 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 HHEXQ03014 270 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 C1orf61Q13536 156 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 KIR2DS5Q14953 304 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 HYAL4Q2M3T9 481 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 C4orf46Q504U0 113 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 SLC35D2Q76EJ3 337 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 EXO5Q9H790 373 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 ELOVL3Q9HB03 270 aa17.24■□□□□ 0.35
SCARF1-206ENST00000573852 KRBOX1C9JBD0 128 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 RAB11BQ15907 218 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 STEAP1BQ6NZ63 245 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 C11orf88Q6PI97 169 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 TMEM184AQ6ZMB5 413 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 KRT77Q7Z794 578 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 OTOSQ8NHW6 89 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 DUSP19Q8WTR2 217 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 MNTQ99583 582 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 C12orf4Q9NQ89 552 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 TMEM184BQ9Y519 407 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-206ENST00000573852 TMEM14AQ9Y6G1 99 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 SPTBN5Q9NRC6 3674 aaKnown RBP17.23■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF264O43296 627 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 WNT11O96014 354 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 NAGAP17050 411 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 CFPP27918 469 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 MAZP56270 477 aaKnown RBP17.23■□□□□ 0.35
SCARF1-206ENST00000573852 MEP1BQ16820 701 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 ARHGAP40Q5TG30 622 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-206ENST00000573852 BVESQ8NE79 360 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 DPYSL5Q9BPU6 564 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 ATG5Q9H1Y0 275 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
SCARF1-206ENST00000573852 YBX2Q9Y2T7 364 aaKnown RBP17.23■□□□□ 0.35
SCARF1-206ENST00000573852 SLC17A2O00624 439 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 SCDO00767 359 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 SRPX2O60687 465 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-206ENST00000573852 PNPP00491 289 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 UBXN2BQ14CS0 331 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 MPPED2Q15777 294 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 C1QL3Q5VWW1 255 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 TMEM92Q6UXU6 159 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 CDH26Q8IXH8 852 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 PLPP7Q8NBV4 271 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF563Q8TA94 476 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 ZNF578Q96N58 590 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-206ENST00000573852 RTN4RQ9BZR6 473 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 POFUT1Q9H488 388 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 LOC100289279A0A1B0GTE1 492 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 C17orf51A8MQB3 221 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 CDC40O60508 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARF1-206ENST00000573852 SPDEFO95238 335 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 UTS2O95399 124 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 CTRB1P17538 263 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 GMFBP60983 142 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 EIF2B5Q13144 721 aaKnown RBP17.22■□□□□ 0.35
SCARF1-206ENST00000573852 CTRB2Q6GPI1 263 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 FAM166AQ6J272 317 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 POMZP3Q6PJE2 187 aa17.22■□□□□ 0.35
SCARF1-206ENST00000573852 ARSKQ6UWY0 536 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms