RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SLC26A11Q86WA9 606 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 NUDT13Q86X67 352 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF567Q8N184 647 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 APCDD1LQ8NCL9 501 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 NPEPL1Q8NDH3 523 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 NEIL3Q8TAT5 605 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ADAMTS16Q8TE57 1224 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CCDC107Q8WV48 283 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ULK4Q96C45 1275 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 RNF157Q96PX1 679 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 TNFRSF13CQ96RJ3 184 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 PKP4Q99569 1192 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 NTMT1Q9BV86 223 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 OSBPL11Q9BXB4 747 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 MROQ9BYG7 248 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 TRIM15Q9C019 465 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 VPS37BQ9H9H4 285 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CDH20Q9HBT6 801 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 C12orf4Q9NQ89 552 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ZDHHC18Q9NUE0 388 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KLHL8Q9P2G9 620 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ATP6V1HQ9UI12 483 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ANAPC7Q9UJX3 599 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 LOC105371267A0A1B0GV96 52 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SAGE2PA6NJ88 616 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TCF21O43680 179 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SCO2O43819 266 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 VPS26AO75436 327 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 LY6HO94772 140 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 NSA2O95478 260 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 C1orf105O95561 183 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 GBAP04062 536 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 P04436 131 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 IFNA16P05015 189 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 FHP07954 510 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 INHBAP08476 426 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SMIM18P0DKX4 95 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SAGP10523 405 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 CRYGSP22914 178 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 KDELR1P24390 212 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 AZGP1P25311 298 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 NR2C2P49116 596 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 STARP49675 285 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ETV1P50549 477 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF140P52738 457 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TMBIM6P55061 237 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 HADHBP55084 474 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 FAM53BQ14153 422 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 PIGHQ14442 188 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 NDUFA9Q16795 377 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 DEFB134Q4QY38 66 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF585BQ52M93 769 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 EIPR1Q53HC9 387 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 C6orf183Q5T699 404 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 OGFRL1Q5TC84 451 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 C11orf88Q6PI97 169 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TMEM64Q6YI46 380 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 OTOAQ7RTW8 1153 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 VN1R4Q7Z5H5 301 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 YRDCQ86U90 279 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 AKAP14Q86UN6 197 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 LACC1Q8IV20 430 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 DCUN1D3Q8IWE4 304 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TIGD4Q8IY51 512 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SLC22A15Q8IZD6 547 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 FBXW8Q8N3Y1 598 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ARL6IP6Q8N6S5 226 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 CNEP1R1Q8N9A8 125 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 BANPQ8N9N5 519 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 SNX31Q8N9S9 440 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 OCC1Q8TAD7 63 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ENKURQ8TC29 256 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ANKRD49Q8WVL7 239 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TAF15Q92804 592 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ATP6V1E2Q96A05 226 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TAMM41Q96BW9 452 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 CDKN2AIPNLQ96HQ2 116 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 HES6Q96HZ4 224 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 MS4A14Q96JA4 679 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 RASL10BQ96S79 203 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 DOK1Q99704 481 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 RHNO1Q9BSD3 238 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 KATNB1Q9BVA0 655 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ANGPTL4Q9BY76 406 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 FN3KQ9H479 309 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 PELI2Q9HAT8 420 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 PROK2Q9HC23 129 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ZC4H2Q9NQZ6 224 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 DCAF16Q9NXF7 216 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF226Q9NYT6 803 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 PRPF19Q9UMS4 504 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 CFL2Q9Y281 166 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 YARS2Q9Y2Z4 477 aaKnown RBP4.61□□□□□ -1.67
SF3B3-214ENST00000572365 ATG4BQ9Y4P1 393 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 WNK2Q9Y3S1 2297 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 PLCE1Q9P212 2302 aa4.61□□□□□ -1.67
SF3B3-214ENST00000572365 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
SF3B3-214ENST00000572365 A0A096LNT2 108 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms