RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 MUC15Q8N387 334 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 CCDC124Q96CT7 223 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 RSRC1Q96IZ7 334 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 Q96MF0 132 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 C1orf21Q9H246 121 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 MUC13Q9H3R2 512 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 STX18Q9P2W9 335 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 SIGLEC7Q9Y286 467 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 YLPM1P49750 1951 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 H7C1C5 153 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 PTP4A3O75365 173 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 UBL3O95164 117 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 GADD45GO95257 159 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 OR8G3PP0DMU2 310 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 RRM2P31350 389 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 CDAP32320 146 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 ACVR1BP36896 505 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 MAGEA2P43356 314 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 PTDSS1P48651 473 aaKnown RBP11.62□□□□□ -0.55
RPAIN-207ENST00000570883 FABP6P51161 128 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 LCN6P62502 163 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 RAB1AP62820 205 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 CD47Q08722 323 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 TRIM25Q14258 630 aaKnown RBP11.62□□□□□ -0.55
RPAIN-207ENST00000570883 MTX3Q5HYI7 312 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 FAM205BPQ63HN1 556 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 SLC25A47Q6Q0C1 308 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 FAM122BQ7Z309 247 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 ZER1Q7Z7L7 766 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 DHFR2Q86XF0 187 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF584Q8IVC4 421 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 FBXL14Q8N1E6 418 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
RPAIN-207ENST00000570883 NABP1Q96AH0 204 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 MCUR1Q96AQ8 359 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 GPX7Q96SL4 187 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-207ENST00000570883 KCNS3Q9BQ31 491 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 CA10Q9NS85 328 aa11.62□□□□□ -0.55
RPAIN-207ENST00000570883 GDF2Q9UK05 429 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-207ENST00000570883 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 TRIM64BA6NI03 449 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 UNC119BA6NIH7 251 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ACOT8O14734 319 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 CD14P08571 375 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 APOBEC3AP31941 199 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-207ENST00000570883 RPL4P36578 427 aaKnown RBP11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF84P51523 738 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 SMIM11AP58511 58 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 MRPS34P82930 218 aaKnown RBP11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ADIPOQQ15848 244 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 SWI5Q1ZZU3 235 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 MST1LQ2TV78 715 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 NRN1LQ496H8 165 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 MESTQ5EB52 335 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 CIARTQ8N365 385 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ARIH2OSQ8N7S6 290 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 NSMAFQ92636 917 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 SLC7A6OSQ96CW6 309 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-207ENST00000570883 RASD2Q96D21 266 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ASB9Q96DX5 294 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 Q96M85 177 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 NRIP3Q9NQ35 241 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 IL20RAQ9UHF4 553 aa11.61□□□□□ -0.55
RPAIN-207ENST00000570883 ABCA1O95477 2261 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 TEX13CA0A0J9YWL9 993 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 A6NIZ1 184 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 NDUFB2O95178 105 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 RAB36O95755 333 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 MMP7P09237 267 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF35P13682 527 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 RAP1BP61224 184 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 RAP1AP62834 184 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 RAB39AQ14964 217 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 OR4F15Q8NGB8 312 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 OR4C15Q8NGM1 316 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 FBXO17Q96EF6 278 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 TRMT61AQ96FX7 289 aaKnown RBP11.6□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF570Q96NI8 536 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 THTPAQ9BU02 230 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-207ENST00000570883 MAGIXQ9H6Y5 334 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 VNN3Q9NY84 501 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 AURKCQ9UQB9 309 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 LYVE1Q9Y5Y7 322 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 ZFHX3Q15911 3703 aa11.6□□□□□ -0.55
RPAIN-207ENST00000570883 H7C1Q1 480 aa11.59□□□□□ -0.55
RPAIN-207ENST00000570883 H7C417 338 aa11.59□□□□□ -0.55
RPAIN-207ENST00000570883 IMPA2O14732 288 aa11.59□□□□□ -0.55
RPAIN-207ENST00000570883 OR10H3O60404 316 aa11.59□□□□□ -0.55
RPAIN-207ENST00000570883 FARS2O95363 451 aaKnown RBP11.59□□□□□ -0.55
RPAIN-207ENST00000570883 SERPINA5P05154 406 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms