RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 BAMBIQ13145 260 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FZD5Q13467 585 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GTF2H2Q13888 395 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GANABQ14697 944 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 EIF4HQ15056 248 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 IRF4Q15306 451 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CST6Q15828 149 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TNXAQ16473 311 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ODF4Q2M2E3 257 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZNF284Q2VY69 593 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CNPY1Q3B7I2 92 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GPR33Q49SQ1 333 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TPRG1LQ5T0D9 272 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OGFRL1Q5TC84 451 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 C9orf135Q5VTT2 229 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LYPLAL1Q5VWZ2 237 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LAIR1Q6GTX8 287 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FAM71F2Q6NXP2 309 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GTF2H2CQ6P1K8 395 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SPESP1Q6UW49 350 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 BTNL3Q6UXE8 466 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 HACD2Q6Y1H2 254 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TMPRSS11AQ6ZMR5 421 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 Q6ZS52 159 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC16A12Q6ZSM3 486 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ACOT7LQ6ZUV0 252 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LARP4Q71RC2 724 aaKnown RBP eCLIP3.21□□□□□ -1.9
SMG6-208ENST00000570874 Q7L0L9 218 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FCRLAQ7L513 359 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 H2BFWTQ7Z2G1 175 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TIPARPQ7Z3E1 657 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRICKLE2Q7Z3G6 844 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LYG2Q86SG7 212 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TBC1D26Q86UD7 250 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RANBP3LQ86VV4 465 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 MEX3DQ86XN8 651 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 PTOV1Q86YD1 416 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CALHM1Q8IU99 346 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ERI1Q8IV48 349 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZNF547Q8IVP9 402 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ADGRG5Q8IZF4 528 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 EID3Q8N140 333 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C2orf73Q8N5S3 287 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 CSNK1A1LQ8N752 337 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PACRGLQ8N7B6 248 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZNF557Q8N988 423 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 C8orf31Q8N9H6 132 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PXT1Q8NFP0 134 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OR4F6Q8NGB9 312 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OR10Q1Q8NGQ4 319 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OR13C5Q8NGS8 318 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PIGXQ8TBF5 258 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LGALS14Q8TCE9 139 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SKA2Q8WVK7 121 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 APH1BQ8WW43 257 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TCEAL3Q969E4 200 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 EME1Q96AY2 570 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MOB3AQ96BX8 217 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PYCR2Q96C36 320 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C8orf44Q96CB5 159 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RCN3Q96D15 328 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 R3HDM4Q96D70 268 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CCDC126Q96EE4 140 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 DCUN1D1Q96GG9 259 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TEX37Q96LM6 180 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 JSRP1Q96MG2 331 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZFP3Q96NJ6 502 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 AMDHD1Q96NU7 426 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TGM7Q96PF1 710 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC38A2Q96QD8 506 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 STACQ99469 402 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MAP3K3Q99759 626 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C2orf88Q9BSF0 95 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TIMM29Q9BSF4 260 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SOX7Q9BT81 388 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C1orf50Q9BV19 199 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OSBPL11Q9BXB4 747 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C1QTNF7Q9BXJ2 289 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CSTL1Q9H114 145 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PPIL3Q9H2H8 161 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 OR51M1Q9H341 326 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLA2Q9H6Q3 261 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 AKTIPQ9H8T0 292 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 EFCAB1Q9HAE3 211 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 EML4Q9HC35 981 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRDM7Q9NQW5 492 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC2A9Q9NRM0 540 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C1GALT1Q9NS00 363 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GPR173Q9NS66 373 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC22A11Q9NSA0 550 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SEMA4GQ9NTN9 838 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PLEKHJ1Q9NW61 149 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TMEM45AQ9NWC5 275 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SDHAF2Q9NX18 166 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TEX10Q9NXF1 929 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 GAR1Q9NY12 217 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 GPR83Q9NYM4 423 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms