RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 ENKD1Q9H0I2 346 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 TAS2R4Q9NYW5 299 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 CD300LBA8K4G0 201 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 RAF1P04049 648 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 KIR2DL3P43628 341 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 GABREP78334 506 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 RUNX2Q13950 521 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 PRAMEF20Q5VT98 475 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 GRINAQ7Z429 371 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 CCL4L1Q8NHW4 92 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 HRASLSQ9HDD0 168 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 CEACAM5P06731 702 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 METAP1P53582 386 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 RPL23AP62750 156 aaKnown RBP14.06□□□□□ -0.16
CIITA-204ENST00000570546 EMC4Q5J8M3 183 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 COMTD1Q86VU5 262 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 SIRT6Q8N6T7 355 aa14.06□□□□□ -0.16
CIITA-204ENST00000570546 NSG1A0A0A6YYJ2 146 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 RFXAPO00287 272 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 HTR5AP47898 357 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 AGBL4Q5VU57 503 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 A0A1W2PS29 197 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 TNFSF12O43508 249 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 DCDP81605 110 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 OR6C1Q96RD1 312 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 ATPIF1Q9UII2 106 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 MCTS1Q9ULC4 181 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 KIAA1217Q5T5P2 1943 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 PLRG1O43660 514 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 M6PRP20645 277 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 CXCL12P48061 93 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 ZNF169Q14929 603 aaPredicted RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 EBPQ15125 230 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 H1FNTQ75WM6 255 aaPredicted RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 FGF21Q9NSA1 209 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 QSER1Q2KHR3 1735 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 AKR7A2O43488 359 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 STK17BO94768 372 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 ACHEP22303 614 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 P2RX1P51575 399 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 PPP2CBP62714 309 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 PPP2CAP67775 309 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 DCLRE1CQ96SD1 692 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 PLSCR3Q9NRY6 295 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 WSB2Q9NYS7 404 aaPredicted RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 TBX21Q9UL17 535 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 ZNF346Q9UL40 294 aaKnown RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 WIF1Q9Y5W5 379 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 TMEM221A6NGB7 291 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 IFITM5A6NNB3 132 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 CRYBB2P43320 205 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 CDK5Q00535 292 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 OR4D6Q8NGJ1 314 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 CNTNAP3Q9BZ76 1288 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 GSX2Q9BZM3 304 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 OR51B6Q9H340 312 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 C6orf106Q9H6K1 298 aaPredicted RBP14.05□□□□□ -0.16
CIITA-204ENST00000570546 FLVCR2Q9UPI3 526 aa14.05□□□□□ -0.16
CIITA-204ENST00000570546 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 ALDH3B1P43353 468 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 DOC2BQ14184 412 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 GLIPR1L1Q6UWM5 242 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 MDGA2Q7Z553 956 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 RNF141Q8WVD5 230 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 OR2A14Q96R47 310 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 TMEM200CA6NKL6 621 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 SLC16A14Q7RTX9 510 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 MKXQ8IYA7 352 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 OR4Q3Q8NH05 313 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 NT5CQ8TCD5 201 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
CIITA-204ENST00000570546 SLC19A3Q9BZV2 496 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 PPM1DO15297 605 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 ELAVL1Q15717 326 aaKnown RBP14.04□□□□□ -0.16
CIITA-204ENST00000570546 SSX1Q16384 188 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 SLC25A35Q3KQZ1 300 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 TCTE3Q8IZS6 198 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 KDM8Q8N371 416 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 GPR32P1Q8NGA4 272 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 ANKRD61A6NGH8 418 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 TRAPPC2LH3BP13 241 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 ZNF749O43361 778 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 APEHP13798 732 aaKnown RBP14.04□□□□□ -0.16
CIITA-204ENST00000570546 EMP3P54852 163 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 KANSL1Q7Z3B3 1105 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 IL1F10Q8WWZ1 152 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 UCN3Q969E3 161 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 PAPOLGQ9BWT3 736 aaKnown RBP14.04□□□□□ -0.16
CIITA-204ENST00000570546 NMNAT2Q9BZQ4 307 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 AUNIPQ9H7T9 357 aa14.04□□□□□ -0.16
CIITA-204ENST00000570546 MSX1P28360 303 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 CTGFP29279 349 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 GZMKP49863 264 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 OR1D5P58170 312 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 MFAP5Q13361 173 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 C14orf28Q4W4Y0 310 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 FAAP20Q6NZ36 180 aa14.03□□□□□ -0.16
CIITA-204ENST00000570546 ANGPTL5Q86XS5 388 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms