RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TXNDC15Q96J42 360 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 CNN2Q99439 309 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 TTYH2Q9BSA4 534 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 RACGAP1Q9H0H5 632 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 ENKD1Q9H0I2 346 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 PIGMQ9H3S5 423 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 MED20Q9H944 212 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SRA1Q9HD15 236 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 HINT3Q9NQE9 182 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 GLTPQ9NZD2 209 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 VSX1Q9NZR4 365 aaPredicted RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 MOKQ9UQ07 419 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 MEMO1Q9Y316 297 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 RPL36Q9Y3U8 105 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FKBP7Q9Y680 259 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SH3D21A4FU49 640 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR6C68A6NDL8 312 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 KDM4EB2RXH2 506 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 DENRO43583 198 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ENTPD6O75354 484 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TNFAIP8O95379 198 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 PRB1P04280 392 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 GYPBP06028 91 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 STSP08842 583 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 QDPRP09417 244 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 GLI4P10075 376 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CTLA4P16410 223 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF823P16415 610 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 BMP5P22003 454 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 GNLYP22749 145 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 EEF1B2P24534 225 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 GSTT1P30711 240 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 HTR1FP30939 366 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 FMO3P31513 532 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 PYCR1P32322 319 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CDKN2AP42771 156 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CAPZA2P47755 286 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR3A2P47893 321 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 MTNR1AP48039 350 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC25A1P53007 311 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 NUDT6P53370 316 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 SH3BGRP55822 239 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACTC1P68032 377 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACTA1P68133 377 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ADAM8P78325 824 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ROR2Q01974 943 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TGFBR3Q03167 851 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF91Q05481 1191 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RUNX1T1Q06455 604 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 PMPCAQ10713 525 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMED1Q13445 227 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 FBXW9Q5XUX1 488 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RTL6Q6ICC9 239 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TFAP2EQ6VUC0 442 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 NUFIP2Q7Z417 695 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCDC71Q8IV32 467 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 GLB1L2Q8IW92 636 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 C20orf196Q8IYI0 205 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RPRMLQ8N4K4 120 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 MARVELD2Q8N4S9 558 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 FAM26EQ8N5C1 309 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZIC4Q8N9L1 334 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 NPEPL1Q8NDH3 523 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF540Q8NDQ6 660 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 BBS1Q8NFJ9 593 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 BPIFB6Q8NFQ5 453 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RHOXF1Q8NHV9 184 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM54Q969K7 222 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RNFT2Q96EX2 444 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 MRPL48Q96GC5 212 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF582Q96NG8 517 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 MYCBPQ99417 103 aaPredicted RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 RBM24Q9BX46 236 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 LINC00470Q9BZP3 86 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 NUAK2Q9H093 628 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 KCNN2Q9H2S1 579 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 SEC61A2Q9H9S3 476 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CRLF2Q9HC73 371 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCNB1IP1Q9NPC3 277 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF226Q9NYT6 803 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 MALT1Q9UDY8 824 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 WARS2Q9UGM6 360 aaKnown RBP5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 TPRKBQ9Y3C4 175 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 DMXL2Q8TDJ6 3036 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACACBO00763 2458 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 PKD1L2Q7Z442 2459 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 DOCK10Q96BY6 2186 aa5.82□□□□□ -1.48
CTDNEP1-204ENST00000570484 EML6Q6ZMW3 1958 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 CIB4A0PJX0 185 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 EFCAB10A6NFE3 127 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 FAM171A2A8MVW0 826 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF99A8MXY4 864 aaPredicted RBP5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC1A7O00341 560 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 DHHO43323 396 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMCC2O75069 709 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 UPK3AO75631 287 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF432O94892 652 aa5.81□□□□□ -1.48
CTDNEP1-204ENST00000570484 GLCEO94923 617 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms