RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ARMC8Q8IUR7 673 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF101Q8IZC7 436 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 RBM15BQ8NDT2 890 aaKnown RBP10.24□□□□□ -0.77
CAPN3-220ENST00000569827 CPEB3Q8NE35 698 aaKnown RBP10.24□□□□□ -0.77
CAPN3-220ENST00000569827 OR6S1Q8NH40 331 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 OR6X1Q8NH79 312 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 NANPQ8TBE9 248 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 IPCEF1Q8WWN9 437 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-220ENST00000569827 C11orf40Q8WZ69 217 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 CCL17Q92583 94 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF566Q969W8 418 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM43Q9BTV4 400 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-220ENST00000569827 SLC13A4Q9UKG4 626 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 PRDM4Q9UKN5 801 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 SOX21Q9Y651 276 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-220ENST00000569827 IGHV3OR16-10A0A075B7F0 116 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ZSCAN5BA6NJL1 495 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 FARS2O95363 451 aaKnown RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SLC2A10O95528 541 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 IGHV1-46P01743 117 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 F13BP05160 661 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 UMPSP11172 480 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ANPEPP15144 967 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ZFP36P26651 326 aaKnown RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 WNT5AP41221 380 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF81P51508 661 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 UCP2P55851 309 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 CLRN1P58418 232 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SELENOVP59797 346 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SEC61A1P61619 476 aaKnown RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DEFA6Q01524 100 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 HSF2Q03933 536 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 FMODQ06828 376 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SELPLGQ14242 412 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 HFEQ30201 348 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 PCGF3Q3KNV8 242 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 PABPC1L2AQ5JQF8 200 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 THEM4Q5T1C6 240 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 LRIF1Q5T3J3 769 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 RANBP3LQ86VV4 465 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 JAZF1Q86VZ6 243 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 BHLHE22Q8NFJ8 381 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 GPR32P1Q8NGA4 272 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 OR6T1Q8NGN1 323 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 AKR7LQ8NHP1 331 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF519Q8TB69 540 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DVL3Q92997 716 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 MCHR2Q969V1 340 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SPDL1Q96EA4 605 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SLC25A44Q96H78 314 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 C1orf147Q96MC9 270 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DCLRE1CQ96SD1 692 aaKnown RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 EBF4Q9BQW3 602 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SPATA5L1Q9BVQ7 753 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DENND2DQ9H6A0 471 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 TCF7L2Q9NQB0 619 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 MMP26Q9NRE1 261 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 DDX28Q9NUL7 540 aaKnown RBP10.23□□□□□ -0.77
CAPN3-220ENST00000569827 SLCO1C1Q9NYB5 712 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 CCDC167Q9P0B6 97 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF69Q9UC07 566 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 FBXL3Q9UKT7 428 aa10.23□□□□□ -0.77
CAPN3-220ENST00000569827 TRBV5-3A0A0A0MS03 114 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 IGKV1D-43A0A0B4J1Z2 117 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 IQCMA0A1B0GVH7 501 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 CHP2O43745 196 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 MFN2O95140 757 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 SNAP29O95721 258 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 MT-ATP6P00846 226 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 MMP7P09237 267 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF32P17041 273 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 SLC6A2P23975 617 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 STX1BP61266 288 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 DUSP7Q16829 419 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 SLC36A2Q495M3 483 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 PRR31Q5SQ13 230 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 WDR93Q6P2C0 686 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 LINC00114Q6XXX2 140 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 RFPL4BQ6ZWI9 263 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 NOXO1Q8NFA2 376 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 RAB1CQ92928 201 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 TIMD4Q96H15 378 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-220ENST00000569827 ARHGDIGQ99819 225 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 CPPED1Q9BRF8 314 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF747Q9BV97 191 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 PARD6BQ9BYG5 372 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 MSL2Q9HCI7 577 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 NANSQ9NR45 359 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 GPR160Q9UJ42 338 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 SLC7A7Q9UM01 511 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 TRIM33Q9UPN9 1127 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 ANGPT4Q9Y264 503 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 USH1CQ9Y6N9 552 aa10.22□□□□□ -0.77
CAPN3-220ENST00000569827 LOC100509620A0A075B734 347 aa10.21□□□□□ -0.77
CAPN3-220ENST00000569827 SLC22A23A1A5C7 686 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms