RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NDUFB2O95178 105 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 STAMBPO95630 424 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 CD14P08571 375 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 CELA3BP08861 270 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 RRM2P31350 389 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 RPL4P36578 427 aaKnown RBP12□□□□□ -0.49
HERPUD1-218ENST00000569569 CDKN1AP38936 164 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 LIMS1P48059 325 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 PTDSS1P48651 473 aaKnown RBP12□□□□□ -0.49
HERPUD1-218ENST00000569569 ATP5J2P56134 94 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 RAP1BP61224 184 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 RAB1AP62820 205 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 RAP1AP62834 184 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 CD47Q08722 323 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 THEM4Q5T1C6 240 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
HERPUD1-218ENST00000569569 SKA3Q8IX90 412 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 ARIH2OSQ8N7S6 290 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 OR4F15Q8NGB8 312 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 ASB9Q96DX5 294 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF75AQ96N20 296 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 TSPAN32Q96QS1 320 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 MAGIXQ9H6Y5 334 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 SMURF2Q9HAU4 748 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 GRHPRQ9UBQ7 328 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 FBXL3Q9UKT7 428 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 TMCC3Q9ULS5 477 aa12□□□□□ -0.49
HERPUD1-218ENST00000569569 GYG2O15488 501 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 OR10H3O60404 316 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 RAB36O95755 333 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF14P17017 642 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 NPR2P20594 1047 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 CALCRP30988 508 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 IFNGR2P38484 337 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 MAGEA2P43356 314 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 GIPRP48546 466 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 HMGA2P52926 109 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 ERVK-25P63136 954 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 CHRNB3Q05901 458 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 TRAP1Q12931 704 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 DNAL1Q4LDG9 190 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC25A47Q6Q0C1 308 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 DPPA2Q7Z7J5 298 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 MYPOPQ86VE0 399 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF519Q8TB69 540 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 NMD3Q96D46 503 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 RSRC1Q96IZ7 334 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 CLPTM1LQ96KA5 538 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 LRGUKQ96M69 825 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 SH3GL3Q99963 347 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 SIAEQ9HAT2 523 aa11.99□□□□□ -0.49
HERPUD1-218ENST00000569569 IGKV1D-43A0A0B4J1Z2 117 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 UNC119BA6NIH7 251 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 AHCYL1O43865 530 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC2A10O95528 541 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 PATE4P0C8F1 98 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 BMP4P12644 408 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF26P17031 533 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 MRPS34P82930 218 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 FMODQ06828 376 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC36A2Q495M3 483 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 FAM98BQ52LJ0 330 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 C11orf71Q6IPW1 123 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 C1orf94Q6P1W5 598 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 TMEM53Q6P2H8 277 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC16A14Q7RTX9 510 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 NUP37Q8NFH4 326 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 FGFBP3Q8TAT2 258 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 NSMAFQ92636 917 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 CCDC124Q96CT7 223 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 SLC7A6OSQ96CW6 309 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 Q96M85 177 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 GPX7Q96SL4 187 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 BTBD10Q9BSF8 475 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 KCNN2Q9H2S1 579 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 RNF121Q9H920 327 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 NOX3Q9HBY0 568 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 NRIP3Q9NQ35 241 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 CA10Q9NS85 328 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 ADAM18Q9Y3Q7 739 aa11.98□□□□□ -0.49
HERPUD1-218ENST00000569569 VSTM5A8MXK1 200 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 TNFRSF11BO00300 401 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 XKRYO14609 159 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 ACOT8O14734 319 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 SERPINA5P05154 406 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 FOSL1P15407 271 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 GUCA1AP43080 201 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 FXYD6P3P58550 94 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 HGFACQ04756 655 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 RAB39AQ14964 217 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 ETFDHQ16134 617 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 GPR139Q6DWJ6 353 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 SMARCD3Q6STE5 483 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 DPY19L2P2Q6ZN68 376 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 LRRC18Q8N456 261 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms