RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 OR52I2Q8NH67 350 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TSEN15Q8WW01 171 aaKnown RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 PCNPQ8WW12 178 aaKnown RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TMEM106AQ96A25 262 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 OMA1Q96E52 524 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 NPAS1Q99742 590 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SPACA1Q9HBV2 294 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 FSCN3Q9NQT6 498 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SPATA2Q9UM82 520 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 VDAC3Q9Y277 283 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 FKBP7Q9Y680 259 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 IGHV1OR21-1A0A087WYE8 117 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TRAV1-2A0A0B4J238 106 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ZSCAN5BA6NJL1 495 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ANXA2P2A6NMY6 339 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 RGS13O14921 159 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 CIDEAO60543 219 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 RBBP9O75884 186 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ANXA2P07355 339 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ASAH2BP0C7U1 165 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 GAAP10253 952 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 IL11P20809 199 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 PITPNAQ00169 270 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 RIN1Q13671 783 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 EBPQ15125 230 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLC29A4Q7RTT9 530 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF440Q8IYI8 595 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SNAPC3Q92966 411 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 MRPL48Q96GC5 212 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 VN1R1Q9GZP7 353 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 FGF21Q9NSA1 209 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLCO1C1Q9NYB5 712 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ABRACLQ9P1F3 81 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 KCNN3Q9UGI6 736 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLC22A13Q9Y226 551 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 WDFY4Q6ZS81 3184 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TRAV8-7A0A075B6U6 113 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SOX1O00570 391 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ITGA10O75578 1167 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 GATBO75879 557 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 MPZL1O95297 269 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TACSTD2P09758 323 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 GP1BBP13224 206 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 CD46P15529 392 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ABCD3P28288 659 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ERP29P30040 261 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ALKBH1Q13686 389 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 GGTLC2Q14390 218 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF674Q2M3X9 581 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TMEM255AQ5JRV8 349 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLC35D3Q5M8T2 416 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TMEM69Q5SWH9 247 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 LYPD8Q6UX82 237 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 STAC2Q6ZMT1 411 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLC16A9Q7RTY1 509 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 OR2T4Q8NH00 348 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ADIPOR1Q96A54 375 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF578Q96N58 590 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ANKRD10Q9NXR5 420 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 MRTO4Q9UKD2 239 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 DMRT1Q9Y5R6 373 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 B4E171 279 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF593O00488 134 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SHOXO15266 292 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SUSD5O60279 629 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 DCNP07585 359 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 H2AFB2P0C5Z0 115 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 STOMP27105 288 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SSTR2P30874 369 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 CCKBRP32239 447 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 CSF2RBP32927 897 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 ACKR1Q16570 336 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 FNDC7Q5VTL7 733 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 YOD1Q5VVQ6 348 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 PAPD4Q6PIY7 484 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TSSK4Q6SA08 328 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 OVCH1Q7RTY7 1134 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 UXS1Q8NBZ7 420 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 DAZLQ92904 295 aaKnown RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 INTS14Q96SY0 518 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 PHF7Q9BWX1 381 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 SLITRK2Q9H156 845 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TTYH1Q9H313 450 aaPredicted RBP7.92□□□□□ -1.14
LINC00558-201ENST00000569422 OR51J1Q9H342 316 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 STMN3Q9NZ72 180 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 MGAT4AQ9UM21 535 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 GAB2Q9UQC2 676 aa7.92□□□□□ -1.14
LINC00558-201ENST00000569422 TP53BP1Q12888 1972 aaPredicted RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ASCC3Q8N3C0 2202 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 FRG2CA6NGY1 282 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 H3BML4 177 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 EIF1AYO14602 144 aaKnown RBP7.91□□□□□ -1.14
LINC00558-201ENST00000569422 SSX5O60225 188 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 UPK3AO75631 287 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 HLA-DOBP13765 273 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 ADRA2CP18825 462 aa7.91□□□□□ -1.14
LINC00558-201ENST00000569422 EIF1AXP47813 144 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms