RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 EFCAB9A8MZ26 197 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 hCG_2039718K7EN88 272 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 GMNNO75496 209 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 DCTN3O75935 186 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 NR2C1P13056 603 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 HSD17B1P14061 328 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 SLC25A16P16260 332 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 CTXN1P60606 82 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 RPL27P61353 136 aaKnown RBP17.52■□□□□ 0.4
CLK3-225ENST00000569063 MRPS34P82930 218 aaKnown RBP17.52■□□□□ 0.4
CLK3-225ENST00000569063 DGCR6Q14129 220 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 SLC36A2Q495M3 483 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 MEX3DQ86XN8 651 aaKnown RBP17.52■□□□□ 0.4
CLK3-225ENST00000569063 PGAM4Q8N0Y7 254 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 FAM156AQ8NDB6 213 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 OR51A7Q8NH64 312 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 C7orf34Q96L11 122 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 TNFRSF13CQ96RJ3 184 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 VRK1Q99986 396 aaPredicted RBP17.52■□□□□ 0.4
CLK3-225ENST00000569063 ALG12Q9BV10 488 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 TAGLN3Q9UI15 199 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 ZNF346Q9UL40 294 aaKnown RBP17.52■□□□□ 0.4
CLK3-225ENST00000569063 CMAHPQ9Y471 501 aa17.52■□□□□ 0.4
CLK3-225ENST00000569063 TRAV27A0A087WT01 109 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 LY6HO94772 140 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 SLC2A10O95528 541 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 RHCEP18577 417 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 GLRXP35754 106 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 EVX1P49640 407 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 FAM205BPQ63HN1 556 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 TMEM53Q6P2H8 277 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 RRM2BQ7LG56 351 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 SLC16A14Q7RTX9 510 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 SVOPLQ8N434 492 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 FAM86B1Q8N7N1 296 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 ANKS4BQ8N8V4 417 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 FNDC8Q8TC99 324 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 SLC7A13Q8TCU3 470 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 SIAEQ9HAT2 523 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 MYOZ1Q9NP98 299 aaPredicted RBP17.51■□□□□ 0.39
CLK3-225ENST00000569063 ARL8BQ9NVJ2 186 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 CD300AQ9UGN4 299 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 FAM32AQ9Y421 112 aaKnown RBP17.51■□□□□ 0.39
CLK3-225ENST00000569063 UGT2A1Q9Y4X1 527 aa17.51■□□□□ 0.39
CLK3-225ENST00000569063 CR1P17927 2039 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 INAFM1C9JVW0 142 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 CDC42EP2O14613 210 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 H1F0P07305 194 aaKnown RBP17.5■□□□□ 0.39
CLK3-225ENST00000569063 PPP2R2BQ00005 443 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 GALK2Q01415 458 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 LOXL1Q08397 574 aaPredicted RBP17.5■□□□□ 0.39
CLK3-225ENST00000569063 TOP3AQ13472 1001 aaPredicted RBP17.5■□□□□ 0.39
CLK3-225ENST00000569063 SAMD4BQ5PRF9 694 aaKnown RBP17.5■□□□□ 0.39
CLK3-225ENST00000569063 THEM4Q5T1C6 240 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 PODNL1Q6PEZ8 512 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 SLC25A47Q6Q0C1 308 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 IGFN1Q86VF2 1251 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 OR13C2Q8NGS9 318 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 ZNF519Q8TB69 540 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 MRPL24Q96A35 216 aaKnown RBP17.5■□□□□ 0.39
CLK3-225ENST00000569063 TSPAN32Q96QS1 320 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 RBP7Q96R05 134 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 RAB1BQ9H0U4 201 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 C1orf198Q9H425 327 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 RNF121Q9H920 327 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 SLC7A8Q9UHI5 535 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 MAGEL2Q9UJ55 1249 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 TMEM5Q9Y2B1 443 aa17.5■□□□□ 0.39
CLK3-225ENST00000569063 NSD1Q96L73 2696 aaPredicted RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 IGKV1D-43A0A0B4J1Z2 117 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 A6NIZ1 184 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 NDUFS8O00217 210 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 GPRIN2O60269 458 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 PTHP01270 115 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 TP53P04637 393 aaPredicted RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 MMP7P09237 267 aaPredicted RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 TCN1P20061 433 aaPredicted RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 PCSK6P29122 969 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 GPR4P46093 362 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 PDLIM4P50479 330 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 RAP1BP61224 184 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 RPS23P62266 143 aaKnown RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 RAP1AP62834 184 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 VLDLRP98155 873 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 FMODQ06828 376 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 CD47Q08722 323 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 ZBED5Q49AG3 693 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 GKAP1Q5VSY0 366 aaPredicted RBP17.49■□□□□ 0.39
CLK3-225ENST00000569063 SLC30A7Q8NEW0 376 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 NABP1Q96AH0 204 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 CDRT15Q96T59 188 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 NDE1Q9NXR1 346 aa17.49■□□□□ 0.39
CLK3-225ENST00000569063 CD5LO43866 347 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 SEMG1P04279 462 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 ZNF26P17031 533 aaPredicted RBP17.48■□□□□ 0.39
CLK3-225ENST00000569063 CDAP32320 146 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 MSMPQ1L6U9 139 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 SPATS1Q496A3 300 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 IQCCQ4KMZ1 466 aa17.48■□□□□ 0.39
CLK3-225ENST00000569063 LRRC18Q8N456 261 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms