RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 FAM24BQ8N5W8 94 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 EID2Q8N6I1 236 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 PNLDC1Q8NA58 520 aaKnown RBP9.96□□□□□ -0.81
PALB2-206ENST00000568219 SLC41A2Q96JW4 573 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 ZMIZ1Q9ULJ6 1067 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 A0A0C4DFX4 3053 aa9.96□□□□□ -0.81
PALB2-206ENST00000568219 A0A1W2PQ45 241 aaPredicted RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 A0A1W2PQY0 241 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 H7C417 338 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
PALB2-206ENST00000568219 GLSO94925 669 aaPredicted RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 IFNA21P01568 189 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 ARG1P05089 322 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 GP1BAP07359 652 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PSMB6P28072 239 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 HTR2CP28335 458 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 ARL4DP49703 201 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 TGIF1Q15583 401 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 MARCH3Q86UD3 253 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 ZNF547Q8IVP9 402 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 MCATQ8IVS2 390 aaKnown RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 NRSN1Q8IZ57 195 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 OR8D2Q9GZM6 311 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PNO1Q9NRX1 252 aaKnown RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 SOHLH2Q9NX45 425 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 NME2P1O60361 137 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 HPP00738 406 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 ITGA5P08648 1049 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 ZNF20P17024 532 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 AMY2BP19961 511 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 RFC3P40938 356 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 DIO1P49895 249 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 KIAA0141Q14154 515 aaPredicted RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 GPR18Q14330 331 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 DHCR24Q15392 516 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PGAP1Q75T13 922 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 RASGRP3Q8IV61 690 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PRR22Q8IZ63 422 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 CMBLQ96DG6 245 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 HHIPQ96QV1 700 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PRRT1Q99946 306 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 SLC25A21Q9BQT8 299 aaPredicted RBP9.96□□□□□ -0.82
PALB2-206ENST00000568219 JAM3Q9BX67 310 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 PBX4Q9BYU1 374 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 SPACA1Q9HBV2 294 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 GHRLQ9UBU3 117 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 FBXO7Q9Y3I1 522 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 TMEM14AQ9Y6G1 99 aa9.96□□□□□ -0.82
PALB2-206ENST00000568219 COL11A2P13942 1736 aaPredicted RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 MYLKQ15746 1914 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 WRBO00258 174 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 XRCC3O43542 346 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 OR8U9P0C7N5 309 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 GALP22466 123 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 RIDAP52758 137 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
PALB2-206ENST00000568219 PPIAP62937 165 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 CDK3Q00526 305 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 KCTD18Q6PI47 426 aaPredicted RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 CAMKVQ8NCB2 501 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 OR51A4Q8NGJ6 313 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 RGP1Q92546 391 aaPredicted RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 PPP1R14AQ96A00 147 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ARRDC3Q96B67 414 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ARHGDIGQ99819 225 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SSX3Q99909 188 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 C2orf42Q9NWW7 574 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 OR6C76A6NM76 312 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ZNF705GA8MUZ8 300 aaPredicted RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 LRP3O75074 770 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 EPPINO95925 133 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 IFNA17P01571 189 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 CD53P19397 219 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TRA2BP62995 288 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 ZNF542PQ5EBM4 170 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TCEAL5Q5H9L2 206 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 PAPD4Q6PIY7 484 aaKnown RBP9.95□□□□□ -0.82
PALB2-206ENST00000568219 WDR88Q6ZMY6 472 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SEMA6DQ8NFY4 1073 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SMARCD2Q92925 531 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 MRI1Q9BV20 369 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 POLE3Q9NRF9 147 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 RASL12Q9NYN1 266 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 PSME4Q14997 1843 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 TRAV8-7A0A075B6U6 113 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 hCG_1809904A0A1W2PP81 198 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 A0A1W2PR64 198 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 A0A1W2PRV1 198 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 BHLHE40O14503 412 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 NFATC1O95644 943 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 RHOP08100 348 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 SFTA3P0C7M3 94 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 CALCBP10092 127 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 PSMA3P25788 255 aa9.95□□□□□ -0.82
PALB2-206ENST00000568219 ACSM1Q08AH1 577 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms