RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	LRRC37B	Q96QE4	947 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TNFRSF13C	Q96RJ3	184 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	DOK1	Q99704	481 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MRPL13	Q9BYD1	178 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MYLK2	Q9H1R3	596 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TXNIP	Q9H3M7	391 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	RNF121	Q9H920	327 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	YAE1D1	Q9NRH1	226 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TMEM38B	Q9NVV0	291 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF224	Q9NZL3	707 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	GMPR2	Q9P2T1	348 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	STX18	Q9P2W9	335 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	RHCG	Q9UBD6	479 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	A4GNT	Q9UNA3	340 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	CMAHP	Q9Y471	501 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SNX13	Q9Y5W8	968 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FKBP7	Q9Y680	259 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ATR	Q13535	2644 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635		A0A096LNT2	108 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	LOC390937	A0A1W2PQ73	354 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NPIPB13	A6NJU9	1138 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NPIPB4	C9JG80	1138 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NDUFS8	O00217	210 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	FFAR1	O14842	300 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GPRIN2	O60269	458 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	CRLF1	O75462	422 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GMNN	O75496	209 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	UBOX5	O94941	541 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SERPINA1	P01009	418 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PTH	P01270	115 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	IFNW1	P05000	195 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ADRA2A	P08913	450 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PATE4	P0C8F1	98 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	MAK	P20794	623 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	USF1	P22415	310 aa	Predicted RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PRDX6	P30041	224 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GLRX	P35754	106 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GSK3B	P49841	420 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NUDT2	P50583	147 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PSME3	P61289	254 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	MYBPC1	Q00872	1141 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GALK2	Q01415	458 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PLP2	Q04941	152 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	PRKCD	Q05655	676 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	RUNX1T1	Q06455	604 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SNTB2	Q13425	540 aa	Known RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	KRT72	Q14CN4	511 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	TAF11	Q15544	211 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	CARTPT	Q16568	116 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ANKDD1A	Q495B1	522 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SLC36A2	Q495M3	483 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NRN1L	Q496H8	165 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	IFI44L	Q53G44	452 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ARMC4	Q5T2S8	1044 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	CYB5R2	Q6BCY4	276 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	KRT80	Q6KB66	452 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	CBLL1	Q75N03	491 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	RRM2B	Q7LG56	351 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SLC16A14	Q7RTX9	510 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	OAF	Q86UD1	273 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	CYP4Z1	Q86W10	505 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	RNF113B	Q8IZP6	322 aa	Known RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SVOPL	Q8N434	492 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF540	Q8NDQ6	660 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	OR4K5	Q8NGD3	323 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NEU4	Q8WWR8	484 aa	Predicted RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	GEMIN6	Q8WXD5	167 aa	Known RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ASB10	Q8WXI3	467 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	RBP7	Q96R05	134 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF347	Q96SE7	839 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SEPHS2	Q99611	448 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	KCTD14	Q9BQ13	255 aa	Predicted RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	KCNN2	Q9H2S1	579 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	SIAE	Q9HAT2	523 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	NOX3	Q9HBY0	568 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	MYOZ1	Q9NP98	299 aa	Predicted RBP	5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	RPS6KA6	Q9UK32	745 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	HIF3A	Q9Y2N7	669 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	COL6A5	A8TX70	2615 aa		5.97	□□□□□ -1.45
SF3B3-209	ENST00000567635	ARHGAP32	A7KAX9	2087 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	DYSF	O75923	2080 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	IQCM	A0A1B0GVH7	501 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC22A23	A1A5C7	686 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635		A8MV72	311 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	EFCAB9	A8MZ26	197 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	VWC2L	B2RUY7	222 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635		J3KTA2	159 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SYNGR3	O43761	229 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	PIP5K1C	O60331	668 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SAG	P10523	405 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NR2C1	P13056	603 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	DAO	P14920	347 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NCK1	P16333	377 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDA	P32320	146 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	GUCA1A	P43080	201 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NR4A2	P43354	598 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	RPS6KA3	P51812	740 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF133	P52736	654 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	CTXN1	P60606	82 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	RPL27	P61353	136 aa	Known RBP	5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms