RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NANOGNBQ7Z5D8 188 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 TSPYL5Q86VY4 417 aaPredicted RBP12.83□□□□□ -0.36
RNF40-209ENST00000566703 CARM1Q86X55 608 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 OR4K5Q8NGD3 323 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 VANGL1Q8TAA9 524 aaPredicted RBP12.83□□□□□ -0.36
RNF40-209ENST00000566703 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 LIPHQ8WWY8 451 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 BCL2L14Q9BZR8 327 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 MEPEQ9NQ76 525 aaPredicted RBP12.83□□□□□ -0.36
RNF40-209ENST00000566703 HIF1ANQ9NWT6 349 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 FZR1Q9UM11 496 aa12.83□□□□□ -0.36
RNF40-209ENST00000566703 CUBNO60494 3623 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 TRAV20A0A0B4J274 112 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 A0A1W2PRG6 482 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 HTR3EA5X5Y0 456 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 NPIPB13A6NJU9 1138 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 NPIPB4C9JG80 1138 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 BLOC1S5-TXNDC5H3BN57 136 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 PPIHO43447 177 aaKnown RBP12.82□□□□□ -0.36
RNF40-209ENST00000566703 TSPAN19P0C672 248 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 GAAP10253 952 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 THRBP10828 461 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 ACADSP16219 412 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 FUT1P19526 365 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 CRYBB2P43320 205 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 DAP3P51398 398 aaKnown RBP12.82□□□□□ -0.36
RNF40-209ENST00000566703 UGT2B15P54855 530 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 LMO4P61968 165 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 MYBPC1Q00872 1141 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
RNF40-209ENST00000566703 TTMPQ5BVD1 217 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 C10orf128Q5T292 105 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 TMEM154Q6P9G4 183 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 MEX3DQ86XN8 651 aaKnown RBP12.82□□□□□ -0.36
RNF40-209ENST00000566703 C1orf174Q8IYL3 243 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 RBM15BQ8NDT2 890 aaKnown RBP12.82□□□□□ -0.36
RNF40-209ENST00000566703 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 NANOGQ9H9S0 305 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 SIAEQ9HAT2 523 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 SMURF2Q9HAU4 748 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 MRGBPQ9NV56 204 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 TREM2Q9NZC2 230 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 BAG5Q9UL15 447 aa12.82□□□□□ -0.36
RNF40-209ENST00000566703 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 MCIDASD6RGH6 385 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 KPNA4O00629 521 aaPredicted RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 TRMUO75648 421 aaKnown RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 NCR1O76036 304 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 OR7A10O76100 309 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 CLPTM1O96005 669 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 NPPAP01160 153 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 MT-ND5P03915 603 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 LCKP06239 509 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 MMP7P09237 267 aaPredicted RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 FAM157BP0CG42 384 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 ITGA2P17301 1181 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 MAGEB1P43366 347 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 MRPS34P82930 218 aaKnown RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 RUNX1T1Q06455 604 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 RPL18Q07020 188 aaKnown RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 FAM209AQ5JX71 171 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 NANOGP8Q6NSW7 305 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 UNQ6126/PRO20091Q6UXV3 157 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 RINLQ6ZS11 566 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 PAQR4Q8N4S7 273 aaPredicted RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 ASB10Q8WXI3 467 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 SGTBQ96EQ0 304 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 ZNF347Q96SE7 839 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 METTL17Q9H7H0 456 aaPredicted RBP12.81□□□□□ -0.36
RNF40-209ENST00000566703 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
RNF40-209ENST00000566703 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
RNF40-209ENST00000566703 OR5F1O95221 314 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 IFNA14P01570 189 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 IGHV3-13P01766 116 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 NR2C1P13056 603 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 CCL2P13500 99 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 APLNRP35414 380 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 CRYBA2P53672 197 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 TAF11Q15544 211 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 ARMC4Q5T2S8 1044 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 ACSM5Q6NUN0 579 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 CALHM3Q86XJ0 350 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 NOXO1Q8NFA2 376 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 FNDC8Q8TC99 324 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 LRRC37BQ96QE4 947 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 ECSITQ9BQ95 431 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 RIMS3Q9UJD0 308 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 SH3GLB1Q9Y371 365 aa12.8□□□□□ -0.36
RNF40-209ENST00000566703 GMNCA6NCL1 334 aa12.79□□□□□ -0.36
RNF40-209ENST00000566703 FBP2O00757 339 aa12.79□□□□□ -0.36
RNF40-209ENST00000566703 WNT9BO14905 357 aa12.79□□□□□ -0.36
RNF40-209ENST00000566703 F13BP05160 661 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms