RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 MSANTD3Q96H12 275 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 MS4A14Q96JA4 679 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 TGM7Q96PF1 710 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 RNF157Q96PX1 679 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 NUDT16L1Q9BRJ7 211 aaKnown RBP0.98□□□□□ -2.25
SMG1-212ENST00000566328 DESI2Q9BSY9 194 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 SPATA16Q9BXB7 569 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 EDEM3Q9BZQ6 932 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 OR2AG1Q9H205 316 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 RABEP2Q9H5N1 569 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 XKR8Q9H6D3 395 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 NARFLQ9H6Q4 476 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 IL26Q9NPH9 171 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ASCL3Q9NQ33 180 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 PFDN4Q9NQP4 134 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 DYRK4Q9NR20 520 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 PARVAQ9NVD7 372 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ATXN10Q9UBB4 475 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ONECUT1Q9UBC0 465 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 SPASTQ9UBP0 616 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 PISDQ9UG56 409 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 STAP1Q9ULZ2 295 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 GPR132Q9UNW8 380 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 NEUROG3Q9Y4Z2 214 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 MED12Q93074 2177 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 FBN2P35556 2912 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ABCA4P78363 2273 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 NIPBLQ6KC79 2804 aaeCLIP0.97□□□□□ -2.25
SMG1-212ENST00000566328 PTPN13Q12923 2485 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PRR14LQ5THK1 2151 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SPTBN1Q01082 2364 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 NUP214P35658 2090 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 HEATR5BQ9P2D3 2071 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IGHV1OR21-1A0A087WYE8 117 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IGHV7-81A0A0B4J1V7 117 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 A0A0J9YXY3 114 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 A0A0J9YYE9 177 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SH3PXD2BA1X283 911 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CTAGE15A4D2H0 777 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR6C74A6NCV1 312 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SLC9B1P1A6NJY1 282 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 WASHC1A8K0Z3 465 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 GOLGA6L19H0YKK7 550 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 GOLGA8MH3BSY2 632 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 H7C0C1 242 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CACNB4O00305 520 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 BTN3A3O00478 584 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CTDSPLO15194 276 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RRP8O43159 456 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 RIPK2O43353 540 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SPOPO43791 374 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 BANF1O75531 89 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 KIAA0754O94854 1291 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PROSCO94903 275 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CDK14O94921 469 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SLC25A14O95258 325 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 TRIM16O95361 564 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CPNE6O95741 557 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IGSF6O95976 241 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IFNB1P01574 187 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TRBC1P01850 177 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CALB1P05937 261 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TPM2P07951 284 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 STSP08842 583 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CT45A8P0DMV1 189 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CT45A9P0DMV2 189 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RNASE2P10153 161 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 RPL22P35268 128 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 ADRA1AP35348 466 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PCK1P35558 622 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PPP1R2P41236 205 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PRKCIP41743 596 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ACTR1BP42025 376 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CDKN2BP42772 138 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RABIFP47224 123 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 UQCRFS1P47985 274 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ATP5OP48047 213 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 HCAR3P49019 387 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SPINT3P49223 89 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 LHX2P50458 406 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CCL11P51671 97 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 KPNA2P52292 529 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 STC1P52823 247 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 YBEYP58557 167 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 ACTR1AP61163 376 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RAD51Q06609 339 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PPIDQ08752 370 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 FUT7Q11130 342 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PIGHQ14442 188 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 ZNF235Q14590 738 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 POU6F1Q14863 301 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 ELOCQ15369 112 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DPYSL2Q16555 572 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DEFB110Q30KQ9 67 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 C18orf21Q32NC0 220 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 PARP15Q460N3 678 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CCSMST1Q4G0I0 132 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms