RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 POU5F2Q8N7G0 328 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM99Q8N816 258 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 OR5D16Q8NGK9 328 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 CCL17Q92583 94 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 KTI12Q96EK9 354 aaPredicted RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 CPPED1Q9BRF8 314 aaPredicted RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 SPATA5L1Q9BVQ7 753 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 LINC00470Q9BZP3 86 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF350Q9GZX5 532 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 C1orf21Q9H246 121 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 SERHL2Q9H4I8 314 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 PRDM13Q9H4Q3 707 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ARMC7Q9H6L4 198 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 KAT8Q9H7Z6 458 aaKnown RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 EVA1AQ9H8M9 152 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 CACYBPQ9HB71 228 aaKnown RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 A4GALTQ9NPC4 353 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 NOX4Q9NPH5 578 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 SLCO1C1Q9NYB5 712 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 MYEF2Q9P2K5 600 aaKnown RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 FZR1Q9UM11 496 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 POLR3KQ9Y2Y1 108 aaPredicted RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 IFT52Q9Y366 437 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 WDR45Q9Y484 360 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 INSIG2Q9Y5U4 225 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TMED7-TICAM2A0A0A6YYA0 188 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 C5orf58C9J3I9 102 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF208O43345 1280 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 FRS3O43559 492 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SERPINB7O75635 380 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 AKR7A3O95154 331 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 MT-ND5P03915 603 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 DBIP07108 87 aaKnown RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ETFAP13804 333 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 RYKP34925 604 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 RASSF2P50749 326 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 PROK1P58294 105 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 PAX8Q06710 450 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 CEACAM7Q14002 265 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 GPR68Q15743 365 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 FXNQ16595 210 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 GTDC1Q4AE62 458 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 COX20Q5RI15 118 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 GCNT6Q5T4J0 391 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 C8orf82Q6P1X6 216 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 C16orf89Q6UX73 402 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 USP51Q70EK9 711 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 CREB3L2Q70SY1 520 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 LINGO2Q7L985 606 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 KRT73Q86Y46 540 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 PEX5LQ8IYB4 626 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ARHGAP24Q8N264 748 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 PARP8Q8N3A8 854 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 C11orf65Q8NCR3 313 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 HIPK4Q8NE63 616 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC38A5Q8WUX1 472 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 RASSF5Q8WWW0 418 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC35B4Q969S0 331 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 RCN3Q96D15 328 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ELMOD3Q96FG2 381 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC47A1Q96FL8 570 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 FAM71F1Q96KD3 344 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ALKBH3Q96Q83 286 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF607Q96SK3 696 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 DIRC2Q96SL1 478 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 NELFAQ9H3P2 528 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 DENND2DQ9H6A0 471 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC35A3Q9Y2D2 325 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 TMED7Q9Y3B3 224 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 SOX21Q9Y651 276 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 KCNE3Q9Y6H6 103 aa7.65□□□□□ -1.18
VPS9D1-205ENST00000565452 IGHV3OR16-10A0A075B7F0 116 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 PRORSD1PA6NEY8 169 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 AQP7P3A6NL99 342 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 FXYD1O00168 92 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 FCMRO60667 390 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 IFNA14P01570 189 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 IGHV4-38-2P0DP08 117 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 CD79AP11912 226 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 IL7RP16871 459 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 IDH2P48735 452 aaKnown RBP7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 NUDT2P50583 147 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 BPIFB3P59826 476 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 RPS26P62854 115 aaKnown RBP7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 CDK6Q00534 326 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 LARS2Q15031 903 aaKnown RBP7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 SYPL1Q16563 259 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 CYP51A1Q16850 503 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 GSG1Q2KHT4 349 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 DEFB112Q30KQ8 113 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 TYW3Q6IPR3 259 aaKnown RBP7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 RGS7BPQ6MZT1 257 aaPredicted RBP7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 C11orf87Q6NUJ2 197 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 LRRN1Q6UXK5 716 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 Q6YL49 198 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 FRRS1Q6ZNA5 592 aa7.64□□□□□ -1.19
VPS9D1-205ENST00000565452 PATL1Q86TB9 770 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms