RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RUNX1T1Q06455 604 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 CD47Q08722 323 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 ST3GAL3Q11203 375 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 TOP3AQ13472 1001 aaPredicted RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 TRIP10Q15642 601 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 FXNQ16595 210 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 MSMPQ1L6U9 139 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 TBC1D28Q2M2D7 210 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 LRRC23Q53EV4 343 aaPredicted RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 CYBRD1Q53TN4 286 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 ALG10Q5BKT4 473 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 RRM2BQ7LG56 351 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 HDDC2Q7Z4H3 204 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 CALHM3Q86XJ0 350 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 ZNF584Q8IVC4 421 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 OR2T12Q8NG77 320 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 OR1J1Q8NGS3 322 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 OR51A7Q8NH64 312 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 ZNF519Q8TB69 540 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 LZICQ8WZA0 190 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 BPIFA2Q96DR5 249 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 FNDC11Q9BVV2 318 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 MRPL13Q9BYD1 178 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 POLR2J2Q9GZM3 115 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 POLR2J3Q9H1A7 115 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 C1orf198Q9H425 327 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 OCEL1Q9H607 264 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 SIAEQ9HAT2 523 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 LPAR2Q9HBW0 351 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 HINT3Q9NQE9 182 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 DECR2Q9NUI1 292 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 FGFR1OP2Q9NVK5 253 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 SLCO1C1Q9NYB5 712 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 TREM2Q9NZC2 230 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 MYEF2Q9P2K5 600 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 STX18Q9P2W9 335 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 RHCGQ9UBD6 479 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 SLC7A8Q9UHI5 535 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 METRNQ9UJH8 293 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 ZNF346Q9UL40 294 aaKnown RBP5.51□□□□□ -1.53
TCF4-228ENST00000565393 C2CD3Q4AC94 2353 aa5.51□□□□□ -1.53
TCF4-228ENST00000565393 C5orf49A4QMS7 147 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 EFCAB9A8MZ26 197 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 B4DSR2 109 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 MGRN1O60291 552 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 SLC2A10O95528 541 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ZNF682O95780 498 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 MT-ND5P03915 603 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 SAGP10523 405 aaPredicted RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 THRBP10828 461 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ANPEPP15144 967 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 STOMP27105 288 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 GCH1P30793 250 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 THBS2P35442 1172 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 MAGEB1P43366 347 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 GDI2P50395 445 aaKnown RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 CRYBA2P53672 197 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 KLF3P57682 345 aaPredicted RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 CTXN1P60606 82 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ERVS71-1P61550 626 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 CCL8P80075 99 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 GUCY1A3Q02108 690 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 MVKQ03426 396 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 RIN1Q13671 783 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 HIST3H3Q16695 136 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 TSTQ16762 297 aaKnown RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 HSP90B2PQ58FF3 399 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 COQ5Q5HYK3 327 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 PABPC1L2AQ5JQF8 200 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ELFN2Q5R3F8 820 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 THEM4Q5T1C6 240 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 FAHD2BQ6P2I3 314 aaPredicted RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 UNQ6126/PRO20091Q6UXV3 157 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 OAFQ86UD1 273 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 IGFN1Q86VF2 1251 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 MEX3DQ86XN8 651 aaKnown RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 MICU2Q8IYU8 434 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ALDH16A1Q8IZ83 802 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 PAQR4Q8N4S7 273 aaPredicted RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 POU5F2Q8N7G0 328 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 NOXO1Q8NFA2 376 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 RP9Q8TA86 221 aaKnown RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 SNX33Q8WV41 574 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ASB10Q8WXI3 467 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 FAHD2AQ96GK7 314 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ZNF426Q9BUY5 554 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ZNF416Q9BWM5 594 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 BCL2L14Q9BZR8 327 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 TXNIPQ9H3M7 391 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 EFCAB1Q9HAE3 211 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ZNF275Q9NSD4 429 aaPredicted RBP5.5□□□□□ -1.53
TCF4-228ENST00000565393 C20orf141Q9NUB4 165 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 ARMCX1Q9P291 453 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 AP3M1Q9Y2T2 418 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 TIMM10BQ9Y5J6 103 aa5.5□□□□□ -1.53
TCF4-228ENST00000565393 SETD2Q9BYW2 2564 aaPredicted RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 A0A1W2PPL8 197 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 HTR3EA5X5Y0 456 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 C17orf100A8MU93 164 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms