RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 DCUN1D3Q8IWE4 304 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 LAS2Q8IYD9 372 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 EXD3Q8N9H8 876 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 DNAAF1Q8NEP3 725 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 OR13C5Q8NGS8 318 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 OR11L1Q8NGX0 322 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 OR4K15Q8NH41 348 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 WFDC5Q8TCV5 224 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 SCARB1Q8WTV0 552 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 SFT2D1Q8WV19 159 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 HMGB4Q8WW32 186 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 NRGNQ92686 78 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 TMEM45BQ96B21 275 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF689Q96CS4 500 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-214ENST00000565274 SLC35A4Q96G79 324 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 THOC3Q96J01 351 aaKnown RBP4.68□□□□□ -1.66
CAPN3-214ENST00000565274 KLHL15Q96M94 604 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 HARBI1Q96MB7 349 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 NEDD4LQ96PU5 975 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 JMJD8Q96S16 334 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 TRMT61BQ9BVS5 477 aaKnown RBP4.68□□□□□ -1.66
CAPN3-214ENST00000565274 ACTRT3Q9BYD9 372 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 OR10A5Q9H207 317 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 FAM83DQ9H4H8 585 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 RNF167Q9H6Y7 350 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 CALHM2Q9HA72 323 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF556Q9HAH1 456 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 BCO1Q9HAY6 547 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 PLSCR3Q9NRY6 295 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 AP5S1Q9NUS5 200 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 SEC14L4Q9UDX3 406 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-214ENST00000565274 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 STUB1Q9UNE7 303 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 SLC27A6Q9Y2P4 619 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 CMAHPQ9Y471 501 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 INSL5Q9Y5Q6 135 aa4.68□□□□□ -1.66
CAPN3-214ENST00000565274 CFAP20Q9Y6A4 193 aaKnown RBP4.68□□□□□ -1.66
CAPN3-214ENST00000565274 MICAL3Q7RTP6 2002 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 LOC102723996A0A087X1L8 192 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 HYKKA2RU49 373 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 CCDC182A6NF36 153 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 B4DXG7 233 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF670-ZNF695F2Z2N8 137 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 TNFRSF11BO00300 401 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 KPNA3O00505 521 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF749O43361 778 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SDC3O75056 442 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF780AO75290 641 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SLC22A5O76082 557 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 LY86O95711 162 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 FGF19O95750 216 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 TXNDC12O95881 172 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 HLA-DQB1P01920 261 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 C1QBP02746 253 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 CATP04040 527 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SCG5P05408 212 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ZNF806P0C7X5 589 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 PNMTP11086 282 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 LAMP1P11279 417 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 COX7A2P14406 83 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 EN2P19622 333 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 GZMHP20718 246 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ZP3P21754 424 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 MYL9P24844 172 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ATP5A1P25705 553 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 TIA1P31483 386 aaKnown RBP eCLIP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 UQCRC1P31930 480 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 XCR1P46094 333 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 PRLHRP49683 370 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 GZMKP49863 264 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 BLKP51451 505 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 IDH3GP51553 393 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 GPR143P51810 404 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 NUDT6P53370 316 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 GFRA1P56159 465 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 CDC42P60953 191 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 RPS7P62081 194 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SNRPGP62308 76 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 RAE1P78406 368 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SSBP2P81877 361 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 SORDQ00796 357 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 CSTF1Q05048 431 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ACSM2AQ08AH3 577 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 QPRTQ15274 297 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 MICAQ29983 383 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 TCTN1Q2MV58 587 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 FAM214AQ32MH5 1076 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 PLEKHN1Q494U1 663 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 GLYR1Q49A26 553 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 COX19Q49B96 90 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 C14orf28Q4W4Y0 310 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 DNLZQ5SXM8 178 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 HENMT1Q5T8I9 393 aaKnown RBP4.67□□□□□ -1.66
CAPN3-214ENST00000565274 CPTPQ5TA50 214 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ACSM2BQ68CK6 577 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 ABLIM2Q6H8Q1 611 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 OR8G2PQ6IF36 304 aa4.67□□□□□ -1.66
CAPN3-214ENST00000565274 TYW3Q6IPR3 259 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms