RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 COL8A2P25067 703 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 ALDH3B1P43353 468 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 LIPEQ05469 1076 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 TBPL2Q6SJ96 375 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 IGFN1Q86VF2 1251 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 ZNF786Q8N393 782 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
USB1-210ENST00000565151 PRRC1Q96M27 445 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 POLR2J2Q9GZM3 115 aaKnown RBP12.62□□□□□ -0.39
USB1-210ENST00000565151 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
USB1-210ENST00000565151 INIPQ9NRY2 104 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 HIF3AQ9Y2N7 669 aa12.62□□□□□ -0.39
USB1-210ENST00000565151 WNT9BO14905 357 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 SLC22A2O15244 555 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 NCR1O76036 304 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 RAB36O95755 333 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 SCG5P05408 212 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 TACSTD2P09758 323 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 FAM157BP0CG42 384 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 THRBP10828 461 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 IFI30P13284 250 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 EVX1P49640 407 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 GSK3BP49841 420 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 SLC7A2P52569 658 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 CLRN1P58418 232 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
USB1-210ENST00000565151 CHRFAM7AQ494W8 412 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 LRRC18Q8N456 261 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 RP9Q8TA86 221 aaKnown RBP12.61□□□□□ -0.39
USB1-210ENST00000565151 UBASH3BQ8TF42 649 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 NEU4Q8WWR8 484 aaPredicted RBP12.61□□□□□ -0.39
USB1-210ENST00000565151 GTF3AQ92664 365 aaKnown RBP12.61□□□□□ -0.39
USB1-210ENST00000565151 YIPF5Q969M3 257 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 BPIFA2Q96DR5 249 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
USB1-210ENST00000565151 TMEM160Q9NX00 188 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 REV1Q9UBZ9 1251 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 MED31Q9Y3C7 131 aa12.61□□□□□ -0.39
USB1-210ENST00000565151 A0A087WUU8 490 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 A0A1W2PRG6 482 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 CXCR6O00574 342 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 CDC42EP2O14613 210 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 SYNGR3O43761 229 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 LMX1BO60663 402 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 NAT2P11245 290 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 APEHP13798 732 aaKnown RBP12.6□□□□□ -0.39
USB1-210ENST00000565151 NCK1P16333 377 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 APEX1P27695 318 aaKnown RBP12.6□□□□□ -0.39
USB1-210ENST00000565151 ALKBH6Q3KRA9 238 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 CBLL1Q75N03 491 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 NRMQ8IXM6 262 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 OFCC1Q8IZS5 231 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 SLC30A7Q8NEW0 376 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 OR13C2Q8NGS9 318 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 TXNIPQ9H3M7 391 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 DYNLRB1Q9NP97 96 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 MYOZ1Q9NP98 299 aaPredicted RBP12.6□□□□□ -0.39
USB1-210ENST00000565151 MRGBPQ9NV56 204 aa12.6□□□□□ -0.39
USB1-210ENST00000565151 ZNF346Q9UL40 294 aaKnown RBP12.6□□□□□ -0.39
USB1-210ENST00000565151 LOC100509620A0A075B734 347 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 TRAV27A0A087WT01 109 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 LOC100289279A0A1B0GTE1 492 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 NPIPB13A6NJU9 1138 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 CENPBD1B2RD01 187 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 NPIPB4C9JG80 1138 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 IFNA14P01570 189 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 IGHMP01871 453 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 WNT5AP41221 380 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 GZMKP49863 264 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 MRPS34P82930 218 aaKnown RBP12.59□□□□□ -0.39
USB1-210ENST00000565151 PRKCDQ05655 676 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 ST3GAL3Q11203 375 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 HNRNPA0Q13151 305 aaKnown RBP12.59□□□□□ -0.39
USB1-210ENST00000565151 TOP3AQ13472 1001 aaPredicted RBP12.59□□□□□ -0.39
USB1-210ENST00000565151 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 IQCCQ4KMZ1 466 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 PABPC1L2AQ5JQF8 200 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 PHC2Q8IXK0 858 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 FAM86B1Q8N7N1 296 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 OR51A7Q8NH64 312 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 NSMAFQ92636 917 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 SNX18Q96RF0 628 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 CHODLQ9H9P2 273 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 SLC7A8Q9UHI5 535 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
USB1-210ENST00000565151 DYSFO75923 2080 aa12.58□□□□□ -0.39
USB1-210ENST00000565151 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
USB1-210ENST00000565151 MCIDASD6RGH6 385 aa12.58□□□□□ -0.4
USB1-210ENST00000565151 M0R233 179 aa12.58□□□□□ -0.4
USB1-210ENST00000565151 IMPA2O14732 288 aa12.58□□□□□ -0.4
USB1-210ENST00000565151 RP2O75695 350 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms