RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 IGFN1Q86VF2 1251 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 ZDHHC21Q8IVQ6 265 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 NRMQ8IXM6 262 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 OR4F15Q8NGB8 312 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC7A13Q8TCU3 470 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 BPIFA2Q96DR5 249 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC25A44Q96H78 314 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SORCS2Q96PQ0 1159 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SH3GL3Q99963 347 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 FUZQ9BT04 418 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 MAGIXQ9H6Y5 334 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 RNF121Q9H920 327 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 INIPQ9NRY2 104 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 TLN2Q9Y4G6 2542 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 AQP12BA6NM10 295 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 H7C417 338 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 DHHO43323 396 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 GPRIN2O60269 458 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 TRMUO75648 421 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 STAMBPO95630 424 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 IGHG1P01857 330 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 TP53P04637 393 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 PGA4P0DJD7 388 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 PGA3P0DJD8 388 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SMIM11AP58511 58 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 DAG1Q14118 895 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 RAB39AQ14964 217 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SWI5Q1ZZU3 235 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 C3orf36Q3SXR2 165 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 PODNL1Q6PEZ8 512 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 LRFN4Q6PJG9 635 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 TBPL2Q6SJ96 375 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF730Q6ZMV8 503 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 AQP12AQ8IXF9 295 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SVOPLQ8N434 492 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 NOXO1Q8NFA2 376 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 FAM168AQ92567 244 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 LRGUKQ96M69 825 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 TRIM15Q9C019 465 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 LRMDAQ9H2I8 198 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 MOV10Q9HCE1 1003 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 B3GNT2Q9NY97 397 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF224Q9NZL3 707 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 ABCA1O95477 2261 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
VPS9D1-204ENST00000565023 TRBV4-1A0A0J9YWV2 114 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 B9A039 149 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 UBL3O95164 117 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 ACADSP16219 412 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 NPR2P20594 1047 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 MAKP20794 623 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 EFNA4P52798 201 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 CBX1P83916 185 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 CD47Q08722 323 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 SEC23BQ15437 767 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 FAM98BQ52LJ0 330 aaKnown RBP11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 ALG10Q5BKT4 473 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 FGD3Q5JSP0 725 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 DNM1P46Q6ZS02 220 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 TMPRSS11FQ6ZWK6 438 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 LRRC18Q8N456 261 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC22A24Q8N4F4 322 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 OR4K5Q8NGD3 323 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 OR51A7Q8NH64 312 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 NSMAFQ92636 917 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 MCHR2Q969V1 340 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 DYNLRB1Q9NP97 96 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 TMEM38BQ9NVV0 291 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC7A8Q9UHI5 535 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 FZR1Q9UM11 496 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 POMPQ9Y244 141 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 HIF3AQ9Y2N7 669 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 FKBP7Q9Y680 259 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
VPS9D1-204ENST00000565023 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 YLPM1P49750 1951 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 TRAV27A0A087WT01 109 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 VSTM5A8MXK1 200 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 GADD45GO95257 159 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 FARS2O95363 451 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC2A10O95528 541 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 OR8G3PP0DMU2 310 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 CCL2P13500 99 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 GPR4P46093 362 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 SLC9A3P48764 834 aa11.78□□□□□ -0.52
VPS9D1-204ENST00000565023 DAP3P51398 398 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms