RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	PLP2	Q04941	152 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	SCARB2	Q14108	478 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLC36A2	Q495M3	483 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	MMEL1	Q495T6	779 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	MAVS	Q7Z434	540 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	RETREG3	Q86VR2	466 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	TREML1	Q86YW5	311 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	SMYD1	Q8NB12	490 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	OR6X1	Q8NH79	312 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	TMEM43	Q9BTV4	400 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	C1orf198	Q9H425	327 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	THAP1	Q9NVV9	213 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	NKIRAS2	Q9NYR9	191 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLC25A37	Q9NYZ2	338 aa		13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968		V9GYY5	206 aa	Predicted RBP	13.51	□□□□□ -0.25
CLCN7-208	ENST00000564968	PRKDC	P78527	4128 aa	Known RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	VWF	P04275	2813 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	CPSF4L	A6NMK7	179 aa	Known RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	TPST2	O60704	377 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	SNAP29	O95721	258 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	CH25H	O95992	272 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MT-ATP6	P00846	226 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	IGHV1-46	P01743	117 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	QDPR	P09417	244 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	UMPS	P11172	480 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	HOXB9	P17482	250 aa	Predicted RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	RBMX	P38159	391 aa	Known RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MPV17	P39210	176 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MIDN	Q504T8	468 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	LRFN4	Q6PJG9	635 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	TREML4	Q6UXN2	200 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	ARMC8	Q8IUR7	673 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MSRB3	Q8IXL7	192 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	OR1J2	Q8NGS2	313 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	GEMIN6	Q8WXD5	167 aa	Known RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	TAF15	Q92804	592 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MAEL	Q96JY0	434 aa	Known RBP	13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF347	Q96SE7	839 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	MCHR1	Q99705	422 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	LRMDA	Q9H2I8	198 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	TCF7L2	Q9NQB0	619 aa		13.5	□□□□□ -0.25
CLCN7-208	ENST00000564968	PLSCR5	A0PG75	271 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	PRORSD1P	A6NEY8	169 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZSCAN5B	A6NJL1	495 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	MCIDAS	D6RGH6	385 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	SNN	O75324	88 aa	Predicted RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	PTH	P01270	115 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	IGHG1	P01857	330 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	OPN1SW	P03999	348 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	PGA4	P0DJD7	388 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	PGA3	P0DJD8	388 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	GATA3	P23771	443 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZFP36	P26651	326 aa	Known RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	GCH1	P30793	250 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF84	P51523	738 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	STX1B	P61266	288 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	BAMBI	Q13145	260 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	SWT1	Q5T5J6	900 aa	Known RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	NANOGNB	Q7Z5D8	188 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	LRRC17	Q8N6Y2	441 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	SYT14	Q8NB59	555 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	NOXO1	Q8NFA2	376 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	DVL3	Q92997	716 aa	Predicted RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLC25A44	Q96H78	314 aa	Predicted RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF607	Q96SK3	696 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	NANS	Q9NR45	359 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLAMF8	Q9P0V8	285 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF69	Q9UC07	566 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	TRIM33	Q9UPN9	1127 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	NOTCH1	P46531	2555 aa		13.49	□□□□□ -0.25
CLCN7-208	ENST00000564968	CHP2	O43745	196 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	IGHV3-13	P01766	116 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLC6A2	P23975	617 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	PRTN3	P24158	256 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	WDR4	P57081	412 aa	Known RBP	13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF74	Q16587	644 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	MOG	Q16653	247 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	PABPC1L2A	Q5JQF8	200 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	TMEM255A	Q5JRV8	349 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	FAM209A	Q5JX71	171 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	THEM4	Q5T1C6	240 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF101	Q8IZC7	436 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	BCL6B	Q8N143	479 aa	Predicted RBP	13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	DEFB108B	Q8NET1	73 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	DCLRE1C	Q96SD1	692 aa	Known RBP	13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	IKZF5	Q9H5V7	419 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	DCAF16	Q9NXF7	216 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	TAS2R5	Q9NYW4	299 aa		13.48	□□□□□ -0.25
CLCN7-208	ENST00000564968	TMEM120B	A0PK00	339 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	C5orf49	A4QMS7	147 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	UBOX5	O94941	541 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	MFN2	O95140	757 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	SLC2A10	O95528	541 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	WNT5A	P41221	380 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	ATP4B	P51164	291 aa		13.47	□□□□□ -0.25
CLCN7-208	ENST00000564968	ZNF718	Q3SXZ3	478 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms