RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 QDPRP09417 244 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 TMIGD3P0DMS9 266 aaPredicted RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 DCKP27707 260 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PYCR1P32322 319 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 TIMP3P35625 211 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 SLC15A1P46059 708 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 SIRPAP78324 504 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PLXDC2Q6UX71 529 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PRSS48Q7RTY5 328 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 UBE2J2Q8N2K1 259 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 CNEP1R1Q8N9A8 125 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 OR51L1Q8NGJ5 315 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 NSMAFQ92636 917 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 GGHQ92820 318 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 ZNF775Q96BV0 537 aaPredicted RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 NMD3Q96D46 503 aaKnown RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 LGALS12Q96DT0 336 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 TMEM80Q96HE8 168 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 TSSK2Q96PF2 358 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 INTS14Q96SY0 518 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 MNTQ99583 582 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 TEAD3Q99594 435 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 SFXN3Q9BWM7 321 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 MRPS26Q9BYN8 205 aaKnown RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 MRPS18AQ9NVS2 196 aaKnown RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 FKBP14Q9NWM8 211 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 KCNG2Q9UJ96 466 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 DIMT1Q9UNQ2 313 aaKnown RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 POLR1DQ9Y2S0 133 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
CLK3-214ENST00000564096 FAM215AQ9Y5M1 114 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 KIAA1549Q9HCM3 1950 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 LAMA5O15230 3695 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PHYHO14832 338 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 MYL12BO14950 172 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 DHHO43323 396 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 HRGP04196 525 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 CDK1P06493 297 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 MRPL3P09001 348 aaKnown RBP11.34□□□□□ -0.59
CLK3-214ENST00000564096 ZNF823P16415 610 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 LAP3P28838 519 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 OR3A2P47893 321 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 ZNF133P52736 654 aaPredicted RBP11.34□□□□□ -0.59
CLK3-214ENST00000564096 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
CLK3-214ENST00000564096 ADAM8P78325 824 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 MVKQ03426 396 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 ST3GAL4Q11206 333 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 GUSBP1Q15486 140 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 TMEM211Q6ICI0 200 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 ERI1Q8IV48 349 aaKnown RBP11.34□□□□□ -0.59
CLK3-214ENST00000564096 C12orf49Q9H741 205 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 ADGRL4Q9HBW9 690 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 MALT1Q9UDY8 824 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 PROCRQ9UNN8 238 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 COA3Q9Y2R0 106 aaPredicted RBP11.34□□□□□ -0.59
CLK3-214ENST00000564096 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 COMMD3-BMI1R4GMX3 469 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 MED12Q93074 2177 aa11.34□□□□□ -0.59
CLK3-214ENST00000564096 TRGV8A0A0C4DH27 118 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 TRIM64A6NGJ6 449 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 HSPB2A8KAH6 182 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 FAM171A2A8MVW0 826 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 DCTN6O00399 190 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 TMCC2O75069 709 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 UPK3AO75631 287 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 FARS2O95363 451 aaKnown RBP11.33□□□□□ -0.6
CLK3-214ENST00000564096 CNOT4O95628 575 aaKnown RBP11.33□□□□□ -0.6
CLK3-214ENST00000564096 SBK2P0C263 348 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 GAAP10253 952 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 NPR2P20594 1047 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 NAA10P41227 235 aaPredicted RBP11.33□□□□□ -0.6
CLK3-214ENST00000564096 CAPZA2P47755 286 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 ENTPD1P49961 510 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 TUBA4AP68366 448 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 ROR2Q01974 943 aaKnown RBP11.33□□□□□ -0.6
CLK3-214ENST00000564096 HSF2Q03933 536 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 HSPB2Q16082 182 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 RTL6Q6ICC9 239 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 SLC25A47Q6Q0C1 308 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 SLC16A9Q7RTY1 509 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 DOLPP1Q86YN1 238 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 SLC35F2Q8IXU6 374 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 OR10H4Q8NGA5 316 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 OR6N2Q8NGY6 317 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 RHNO1Q9BSD3 238 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
CLK3-214ENST00000564096 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 YIPF3Q9GZM5 350 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 SEC61A2Q9H9S3 476 aa11.33□□□□□ -0.6
CLK3-214ENST00000564096 CRLF2Q9HC73 371 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms