RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 RAMP1O60894 148 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 PMS2P2O95744 297 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 IL18BPO95998 194 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CGAP01215 116 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 IL2RAP01589 272 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 TMIGD3P0DMS9 266 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 IGFBP2P18065 325 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CTSSP25774 331 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 MTNR1AP48039 350 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 P2RY4P51582 365 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 AGFG1P52594 562 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 WNT4P56705 351 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 AADACL4Q5VUY2 407 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF613Q6PF04 617 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 NKAIN4Q8IVV8 208 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 OR8D4Q8NGM9 314 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 ROBO4Q8WZ75 1007 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 INTS12Q96CB8 462 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 C6orf62Q9GZU0 229 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 EGLN3Q9H6Z9 239 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 KLF2Q9Y5W3 355 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
SCAMP2-203ENST00000563663 PRR14LQ5THK1 2151 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 A0A087WUJ7 227 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 SLC35F4A4IF30 521 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 NKX2-6A6NCS4 301 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 SURF4O15260 269 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 FKBP2P26885 142 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 ACSM1Q08AH1 577 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 ALG10BQ5I7T1 473 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 ULK3Q6PHR2 472 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF620Q6ZNG0 422 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 MAMDC2Q7Z304 686 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 DNAJA4Q8WW22 397 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 COQ7Q99807 217 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 MED18Q9BUE0 208 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 SFXN3Q9BWM7 321 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 POTEKPQ9BYX7 375 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 FN3KQ9H479 309 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 COQ3Q9NZJ6 369 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 SPIN1Q9Y657 262 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 CSMD2Q7Z408 3487 aa13.11□□□□□ -0.31
SCAMP2-203ENST00000563663 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF716A6NP11 495 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 A8MVM7 634 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 IL1AP01583 271 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 CRHP06850 196 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 FCGR2AP12318 317 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 BMP5P22003 454 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 ETV1P50549 477 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 RORCP51449 518 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 DOC2BQ14184 412 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 SGCBQ16585 318 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 NXNL2Q5VZ03 156 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 BCDIN3DQ7Z5W3 292 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 LYSMD2Q8IV50 215 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 SLC43A2Q8N370 569 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 PARP16Q8N5Y8 322 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 KTI12Q96EK9 354 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 RNFT2Q96EX2 444 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 HS6ST2Q96MM7 605 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 RNF167Q9H6Y7 350 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 PLEKHB1Q9UF11 243 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
SCAMP2-203ENST00000563663 FAM90A27PA6NNH2 459 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 SULT2B1O00204 365 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 DNPH1O43598 174 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 CHP2O43745 196 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 CYTIPO60759 359 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 CXCR1P25024 350 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 PSMD7P51665 324 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 HIST2H2BCQ6DN03 193 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 TMPRSS11FQ6ZWK6 438 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 FCRLAQ7L513 359 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 CHMP1BQ7LBR1 199 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 ZNF485Q8NCK3 441 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 STK35Q8TDR2 534 aa13.09□□□□□ -0.31
SCAMP2-203ENST00000563663 CA5BP1Q8WTZ4 195 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms