RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SYT12Q8IV01 421 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 LGI3Q8N145 548 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 TMEM199Q8N511 208 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR1B1Q8NGR6 318 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR1J2Q8NGS2 313 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR5AK3PQ8NH89 298 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 SFXN5Q8TD22 340 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 ATOH1Q92858 354 aaPredicted RBP4.25□□□□□ -1.73
SMG1-207ENST00000563235 COX4I2Q96KJ9 171 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 HBEGFQ99075 208 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 PHB2Q99623 299 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 GGACTQ9BVM4 153 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 CCDC90BQ9GZT6 254 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 KLHL31Q9H511 634 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 SEBOXQ9HB31 216 aaPredicted RBP4.25□□□□□ -1.73
SMG1-207ENST00000563235 AMBNQ9NP70 447 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 ADARB2Q9NS39 739 aaKnown RBP4.25□□□□□ -1.73
SMG1-207ENST00000563235 CISD1Q9NZ45 108 aaKnown RBP4.25□□□□□ -1.73
SMG1-207ENST00000563235 OR14J1Q9UGF5 321 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 EBF1Q9UH73 591 aa4.25□□□□□ -1.73
SMG1-207ENST00000563235 USP6P35125 1406 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 TIAM2Q8IVF5 1701 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 RBBP6Q7Z6E9 1792 aaKnown RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 SMIM9A6NGZ8 99 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR11H12B2RN74 326 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SLC16A5O15375 505 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 RAD51CO43502 376 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 EIF4EBP3O60516 100 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 ADORA3P0DMS8 318 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 GYPEP15421 78 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 FUT3P21217 361 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ANOS1P23352 680 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 HRH2P25021 359 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 HTR1FP30939 366 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR3A3P47888 321 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 GLRBP48167 497 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SERPINB10P48595 397 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 TMEM132DQ14C87 1099 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 C14orf28Q4W4Y0 310 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 C9orf135Q5VTT2 229 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 HLA-DQA1Q5Y7H0 255 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ZNF776Q68DI1 518 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 TMEM42Q69YG0 159 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 STUMQ69YW2 141 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PWWP2BQ6NUJ5 590 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 Q6ZSR9 355 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 NET1Q7Z628 596 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 NLRX1Q86UT6 975 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SPATA6LQ8N4H0 392 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR11H1Q8NG94 326 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR6N2Q8NGY6 317 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR11H2Q8NH07 326 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 GRPEL2Q8TAA5 225 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 GCDHQ92947 438 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 IRF7Q92985 503 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OTULINQ96BN8 352 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 DCLRE1CQ96SD1 692 aaKnown RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 EPYCQ99645 322 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 GPR22Q99680 433 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ATP5SQ99766 215 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SYT3Q9BQG1 590 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 VPS25Q9BRG1 176 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 DPCDQ9BVM2 203 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 OSBPL11Q9BXB4 747 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 RDH14Q9HBH5 336 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 NMRAL1Q9HBL8 299 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 NIT2Q9NQR4 276 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 AGPAT4Q9NRZ5 378 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PPP4R1LQ9P1A2 415 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 OR12D3Q9UGF7 316 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 UBQLN1Q9UMX0 589 aaKnown RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 UFC1Q9Y3C8 167 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ADGRA3Q8IWK6 1321 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 COL5A2P05997 1499 aaPredicted RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 NFAT5O94916 1531 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 A0A0U1RQF3 1178 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 CCDC160A6NGH7 325 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SRRM4A7MD48 611 aaKnown RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 E5RGE8 158 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PLPP3O14495 311 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PHYHO14832 338 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ZNF623O75123 536 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 VENTXO95231 258 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 TIAF1O95411 115 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 IGF1P05019 195 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 CTSLP07711 333 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 DAOP14920 347 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ZNF23P17027 643 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 ERP29P30040 261 aaKnown RBP4.24□□□□□ -1.73
SMG1-207ENST00000563235 GRPRP30550 384 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PLA2G5P39877 138 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 KIR2DS4P43632 304 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 P2RY1P47900 373 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 DNAJB13P59910 316 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 PAX2Q02962 417 aa4.24□□□□□ -1.73
SMG1-207ENST00000563235 TFDP2Q14188 446 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms