RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PHYHO14832 338 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 KIR3DL2P43630 455 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 SOX2P48431 317 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 DAP3P51398 398 aaKnown RBP17.12■□□□□ 0.33
SMPD3-203ENST00000563226 TRIQKQ629K1 86 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 NDUFAF7Q7L592 441 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 MDGA2Q7Z553 956 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 FRMD6Q96NE9 622 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 MMP28Q9H239 520 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 PROK2Q9HC23 129 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 SERINC1Q9NRX5 453 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 PISDQ9UG56 409 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 A6NIZ1 184 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 CD59P13987 128 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 CRABP1P29762 137 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 RAP1BP61224 184 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 RAP1AP62834 184 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 OPN5Q6U736 354 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 PPP1R32Q7Z5V6 425 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 OR51A4Q8NGJ6 313 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 PHYHIPQ92561 330 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 MFRPQ9BY79 579 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 SLC22A4Q9H015 551 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 AKAP7Q9P0M2 348 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-203ENST00000563226 SDK2Q58EX2 2172 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 TRBV5-5A0A0J9YX44 114 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF814B7Z6K7 855 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 KLK2P20151 261 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 OTX2P32243 289 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SFTPDP35247 375 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 PTGS2P35354 604 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SSR4P51571 173 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 P2RY4P51582 365 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 MAP2K6P52564 334 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 MRPL28Q13084 256 aaKnown RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SLC17A1Q14916 467 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 Q499Y3 187 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 WDR38Q5JTN6 314 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF468Q5VIY5 522 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SLC18B1Q6NT16 456 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 NHLRC1Q6VVB1 395 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 RAB11FIP2Q7L804 512 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 C4orf45Q96LM5 186 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 OR5B2Q96R09 309 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 BRD7Q9NPI1 651 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 PADI1Q9ULC6 663 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 B3GALT5Q9Y2C3 310 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 RPH3AQ9Y2J0 694 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 A0A1W2PNV4 684 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 CDX4O14627 284 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 FZD7O75084 574 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 AVPR2P30518 371 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 BLVRAP53004 296 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 BIDP55957 195 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 GLO1Q04760 184 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SNTA1Q13424 505 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 EIF2B1Q14232 305 aaKnown RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 HES5Q5TA89 166 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 ESPNLQ6ZVH7 1005 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 RPS19BP1Q86WX3 136 aaKnown RBP17.11■□□□□ 0.33
SMPD3-203ENST00000563226 PLCZ1Q86YW0 608 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 SLC26A10Q8NG04 563 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 CT55Q8WUE5 264 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 ABHD6Q9BV23 337 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 FANCFQ9NPI8 374 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 TCFL5Q9UL49 500 aa17.11■□□□□ 0.33
SMPD3-203ENST00000563226 NPIPB13A6NJU9 1138 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 NPIPB4C9JG80 1138 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 TFECO14948 347 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-203ENST00000563226 LANCL1O43813 399 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 PNPP00491 289 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 TCN2P20062 427 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 RBMS1P29558 406 aaKnown RBP17.1■□□□□ 0.33
SMPD3-203ENST00000563226 TALDO1P37837 337 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 OR2B6P58173 313 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 MLF1P58340 268 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 Q0VFX4 171 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 C6orf15Q6UXA7 325 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-203ENST00000563226 EGFL6Q8IUX8 553 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF679Q8IYX0 411 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF433Q8N7K0 673 aaPredicted RBP17.1■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF676Q8N7Q3 588 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 C19orf18Q8NEA5 215 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 LGALS14Q8TCE9 139 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 PPP1R14AQ96A00 147 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 KCNJ15Q99712 375 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 PTGES2Q9H7Z7 377 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 SH2D2AQ9NP31 389 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 ABRACLQ9P1F3 81 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 PCDHGA5Q9Y5G8 931 aa17.1■□□□□ 0.33
SMPD3-203ENST00000563226 A0A1W2PNU3 283 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-203ENST00000563226 A0A1W2PQ72 361 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 TRABD2BA6NFA1 517 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 FAM47E-STBD1D6RA91 191 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 RAMP1O60894 148 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 TPTEP56180 551 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 MFGE8Q08431 387 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-203ENST00000563226 OR7E24Q6IFN5 339 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms