RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HAT1O14929 419 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DPM1O60762 260 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 EIF3GO75821 320 aaKnown RBP eCLIP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 KRT34O76011 436 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 MOSP00540 346 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CSF3P09919 207 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GKN3PP0CG01 181 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CCNB1P14635 433 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 FUT3P21217 361 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GABRR1P24046 479 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 RAB7AP51149 207 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 RAB9AP51151 201 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DLX1P56177 255 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CLDN8P56748 225 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 NUTF2P61970 127 aaKnown RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 PAX5Q02548 391 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF92Q03936 586 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 UNC119Q13432 240 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 FZD2Q14332 565 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GABRA6Q16445 453 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 HSP90B2PQ58FF3 399 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CTRB2Q6GPI1 263 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 SCARA5Q6ZMJ2 495 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 MICU2Q8IYU8 434 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 PDCL2Q8N4E4 241 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 PQLC3Q8N755 202 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 C14orf178Q8N769 122 aaPredicted RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CCDC71LQ8N9Z2 235 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 OR4C5Q8NGB2 326 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GPX8Q8TED1 209 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 TSEN15Q8WW01 171 aaKnown RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ACOT11Q8WXI4 607 aaPredicted RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 FGF14Q92915 247 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 UCN3Q969E3 161 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 EEF1AKMT3Q96AZ1 226 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DNAJC19Q96DA6 116 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DYNLL2Q96FJ2 89 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DUS3LQ96G46 650 aaKnown RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 SH3GL1Q99961 368 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ANKRD60Q9BZ19 345 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 UCK2Q9BZX2 261 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 RACGAP1Q9H0H5 632 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DNTTIP1Q9H147 329 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 OR2AG1Q9H205 316 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 BLZF1Q9H2G9 400 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 RPF2Q9H7B2 306 aaKnown RBP2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 IL26Q9NPH9 171 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 HRASLS2Q9NWW9 162 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 TMEM9Q9P0T7 183 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 DEC1Q9P2X7 70 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GOLT1BQ9Y3E0 138 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 HEBP2Q9Y5Z4 205 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ATRXP46100 2492 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF726A6NNF4 738 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 BCKDKO14874 412 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 HCRTR1O43613 425 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CHST1O43916 411 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 AIFM1O95831 613 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 KRT16P08779 473 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CHTF8P0CG12 524 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 ICAM2P13598 275 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CX3CR1P49238 355 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 SH3BGRP55822 239 aaPredicted RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CARD18P57730 90 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 RAB11AP62491 216 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 NDPQ00604 133 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC25A11Q02978 314 aaKnown RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 AQP6Q13520 282 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 RAB11BQ15907 218 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 PTPN20Q4JDL3 420 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 LRRC10Q5BKY1 277 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 NCCRP1Q6ZVX7 275 aaPredicted RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CMC1Q7Z7K0 106 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 SCD5Q86SK9 330 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 IQCKQ8N0W5 287 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 NKAPP1Q8N9T2 125 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 TTC29Q8NA56 475 aaPredicted RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 OR9G4Q8NGQ1 327 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 NEIL3Q8TAT5 605 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 NUBPLQ8TB37 319 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 GEMIN6Q8WXD5 167 aaKnown RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 PIBF1Q8WXW3 757 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CERS2Q96G23 380 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 B3GALT6Q96L58 329 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 RIOK2Q9BVS4 552 aaKnown RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 GABARAPL3Q9BY60 117 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 GPATCH2LQ9NWQ4 482 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 CLCF1Q9UBD9 225 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 ST3GAL6Q9Y274 331 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC17A4Q9Y2C5 497 aa2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 MRPS18BQ9Y676 258 aaKnown RBP2.28□□□□□ -2.04
SHCBP1-202ENST00000563219 FANCIQ9NVI1 1328 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 A0A1B0GVI7 797 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms