RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TMEM50AO95807 157 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 CISD3P0C7P0 127 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 TLX1NBP0CAT3 122 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 PSMC3P17980 439 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 NPY1RP25929 384 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 IFNA8P32881 189 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 NAMPTP43490 491 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ARFIP1P53367 373 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 KCNJ2P63252 427 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 TCP10Q12799 353 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 PON3Q15166 354 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 C6orf226Q5I0X4 101 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 Q6ZR03 302 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 CCDC73Q6ZRK6 1079 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 NCCRP1Q6ZVX7 275 aaPredicted RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ABHD13Q7L211 337 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 NBPF5PQ86XG9 351 aaPredicted RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 EGFL6Q8IUX8 553 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 TBC1D21Q8IYX1 336 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ZCCHC7Q8N3Z6 543 aaKnown RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 STPG2Q8N412 459 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 EIF1ADQ8N9N8 165 aaKnown RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 OR8J1Q8NGP2 316 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 OR5W2Q8NH69 310 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 OR4S2Q8NH73 311 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 UBE2Q2Q8WVN8 375 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 FAM3DQ96BQ1 224 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 TM4SF18Q96CE8 201 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 LINC00477Q96M19 166 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 WFIKKN1Q96NZ8 548 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 P2RX4Q99571 388 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ZBTB18Q99592 522 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 SPIN2AQ99865 258 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 SPIN2BQ9BPZ2 258 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 RSPO3Q9BXY4 272 aaPredicted RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 RPP21Q9H633 154 aaKnown RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 RPF2Q9H7B2 306 aaKnown RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ZNF629Q9UEG4 869 aaPredicted RBP1.72□□□□□ -2.13
DENND4A-205ENST00000562540 SUN2Q9UH99 717 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 OPN4Q9UHM6 478 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ZNF639Q9UID6 485 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 ZNF835Q9Y2P0 537 aa1.72□□□□□ -2.13
DENND4A-205ENST00000562540 CENPJQ9HC77 1338 aaPredicted RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 TRAV39A0A0B4J263 110 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 FAM240BA0A1B0GVZ2 78 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 A0A1W2PPE3 182 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 CXCL11O14625 94 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 SURF6O75683 361 aaKnown RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 VAMP5O95183 116 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 C6orf47O95873 294 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 ZNF286BP0CG31 522 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 FOLR1P15328 257 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 NCF2P19878 526 aaPredicted RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 HRH1P35367 487 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 TPMTP51580 245 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 NUTF2P61970 127 aaKnown RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 PPIL2Q13356 520 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 MOBPQ13875 183 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 GK3PQ14409 553 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 TGFBIQ15582 683 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 LY6EQ16553 131 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 VAX1Q5SQQ9 334 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 RUFY3Q7L099 469 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 BIVMQ86UB2 503 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 RNF182Q8N6D2 247 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 EID2Q8N6I1 236 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 ARL6IP6Q8N6S5 226 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 ZNF615Q8N8J6 731 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 OR4F6Q8NGB9 312 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 PIK3IP1Q96FE7 263 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 ZNF578Q96N58 590 aaPredicted RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 CHAC1Q9BUX1 264 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 GCOM2Q9BZD3 368 aaPredicted RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 PARP12Q9H0J9 701 aaKnown RBP1.71□□□□□ -2.14
DENND4A-205ENST00000562540 ISYNA1Q9NPH2 558 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 SLC7A8Q9UHI5 535 aa1.71□□□□□ -2.14
DENND4A-205ENST00000562540 GAKO14976 1311 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 ATP10AO60312 1499 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 C7orf66A4D0T2 115 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 ZNF705GA8MUZ8 300 aaPredicted RBP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 F6UB75 175 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 H0YHG0 523 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 FOXE1O00358 373 aaPredicted RBP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 SRP72O76094 671 aaKnown RBP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 UTS2O95399 124 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 RAB3DO95716 219 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 AIFM1O95831 613 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 SERPIND1P05546 499 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 IGHV1-8P0DP01 117 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 TCN2P20062 427 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 MX1P20591 662 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 CRYBB2P43320 205 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 CDKN1BP46527 198 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 RFX3P48380 749 aa1.7□□□□□ -2.14
DENND4A-205ENST00000562540 YWHAGP61981 247 aaKnown RBP eCLIP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 RPL23AP62750 156 aaKnown RBP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 IRX3P78415 501 aaPredicted RBP1.7□□□□□ -2.14
DENND4A-205ENST00000562540 CLINT1Q14677 625 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms