RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PLOD1Q02809 727 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 PPIDQ08752 370 aaKnown RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 SLC10A7Q0GE19 358 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 PIGHQ14442 188 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 CAMK4Q16566 473 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CCDC183Q5T5S1 534 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 REG3GQ6UW15 175 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 HACD2Q6Y1H2 254 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ZNF600Q6ZNG1 722 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 Q6ZPB1 254 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 ERASQ7Z444 233 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 IFNEQ86WN2 208 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 MCOLN2Q8IZK6 566 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 LYG1Q8N1E2 194 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ATPAF2Q8N5M1 289 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 FADS6Q8N9I5 356 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ZSCAN4Q8NAM6 433 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 OR5AU1Q8NGC0 362 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 OR6T1Q8NGN1 323 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 ZNF671Q8TAW3 534 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 FNDC8Q8TC99 324 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 PDCD6IPQ8WUM4 868 aaKnown RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 ANKRD9Q96BM1 317 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 C19orf60Q96EN9 201 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 DNAJA3Q96EY1 480 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 C11orf24Q96F05 449 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 TTC25Q96NG3 672 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 SLC30A2Q9BRI3 323 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 TUBGCP2Q9BSJ2 902 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CRACR2AQ9BSW2 395 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 SLC7A5P2Q9GIP4 190 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 SMOXQ9NWM0 555 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 HRASLS2Q9NWW9 162 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 FAM120CQ9NX05 1096 aaKnown RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 STMN3Q9NZ72 180 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CRLS1Q9UJA2 301 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 CSAG2Q9Y5P2 127 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 KIAA1549LQ6ZVL6 1849 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 UBR5O95071 2799 aaPredicted RBP2.9□□□□□ -1.95
HERC1-215ENST00000561436 TEX15Q9BXT5 2789 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 DOCK6Q96HP0 2047 aa2.9□□□□□ -1.95
HERC1-215ENST00000561436 LAMA1P25391 3075 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ASXL3Q9C0F0 2248 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 TRAV9-2A0A087WT02 112 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 C1orf232A0A0U1RR37 186 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 IDSB3KWA1 339 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ANGPT2O15123 496 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 TM9SF1O15321 606 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 SRPX2O60687 465 aaPredicted RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 IGHV3-9P01782 118 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 WNT2P09544 360 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 RALBP11234 206 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 GATA1P15976 413 aaPredicted RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 IGFBP5P24593 272 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 RPL4P36578 427 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 ACVR1BP36896 505 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ZNF33BQ06732 778 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 PUDPQ08623 228 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 KLHL30Q0D2K2 578 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ACACAQ13085 2346 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 SPTAN1Q13813 2472 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 PAFAH1B3Q15102 231 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 PDK2Q15119 407 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 HADHQ16836 314 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 TATDN3Q17R31 274 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 C15orf32Q32M92 178 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 SLC22A6Q4U2R8 563 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 BCL7AQ4VC05 210 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 PRR30Q53SZ7 412 aaPredicted RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 DNAJC21Q5F1R6 531 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 CCDC122Q5T0U0 273 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 RNLSQ5VYX0 342 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 OR8G2PQ6IF36 304 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 PRMT9Q6P2P2 845 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 FAM92BQ6ZTR7 304 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 BZW1Q7L1Q6 419 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 P2RY8Q86VZ1 359 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 TMEM17Q86X19 198 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ZNF547Q8IVP9 402 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 NPWQ8N729 165 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 RHOXF1Q8NHV9 184 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 JOSD2Q8TAC2 188 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 IL1F10Q8WWZ1 152 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 CELF6Q96J87 481 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 MCEEQ96PE7 176 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 PPP1R2P1Q96PQ5 205 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 OR5M11Q96RB7 305 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 C11orf70Q9BRQ4 267 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 SPATA16Q9BXB7 569 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 MRPL13Q9BYD1 178 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 COMMD4Q9H0A8 199 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 OPN3Q9H1Y3 402 aaPredicted RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 OR2AG1Q9H205 316 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 DHX35Q9H5Z1 703 aaKnown RBP2.89□□□□□ -1.95
HERC1-215ENST00000561436 VPS37BQ9H9H4 285 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 RBM22Q9NW64 420 aaKnown RBP eCLIP2.89□□□□□ -1.95
HERC1-215ENST00000561436 CLEC5AQ9NY25 188 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ARMCX1Q9P291 453 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 DPM3Q9P2X0 92 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms