RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SLC10A1Q14973 349 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TBCEQ15813 527 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZSWIM7Q19AV6 140 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 HKDC1Q2TB90 917 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZBED5Q49AG3 693 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 IFI44LQ53G44 452 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CYBRD1Q53TN4 286 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ESCO2Q56NI9 601 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OTUD3Q5T2D3 398 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 GCNT6Q5T4J0 391 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MFSD4BQ5TF39 518 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OR4C11Q6IEV9 310 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OR4F3Q6IEY1 312 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OR2T5Q6IEZ7 315 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 REEP3Q6NUK4 255 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SPESP1Q6UW49 350 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMEM205Q6UW68 189 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMEM64Q6YI46 380 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 Q6ZSV7 163 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LANCL3Q6ZV70 420 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SLC46A3Q7Z3Q1 461 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CPEB2Q7Z5Q1 589 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 GPR141Q7Z602 305 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 NOXA1Q86UR1 476 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ANKRD46Q86W74 232 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 AMIGO1Q86WK6 493 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ERI1Q8IV48 349 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZDHHC21Q8IVQ6 265 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MSRB3Q8IXL7 192 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 PARP16Q8N5Y8 322 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SLC5A8Q8N695 610 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LMNTD1Q8N9Z9 388 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TTC29Q8NA56 475 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 OR2T29Q8NH02 315 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CLHC1Q8NHS4 586 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 PSMA8Q8TAA3 256 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 FBXO30Q8TB52 745 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZFP90Q8TF47 636 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 NAT14Q8WUY8 206 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMEM170AQ8WVE7 144 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CYGBQ8WWM9 190 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 METTL21AQ8WXB1 218 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMBIM1Q969X1 311 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 DTNBP1Q96EV8 351 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 Q96MT0 163 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZNF48Q96MX3 618 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZNF607Q96SK3 696 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SLC29A1Q99808 456 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SLC35A5Q9BS91 424 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 INPP5KQ9BT40 448 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TEX12Q9BXU0 123 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 GABARAPL1Q9H0R8 117 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MMP27Q9H306 513 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 KLHL31Q9H511 634 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 NTN4Q9HB63 628 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CACYBPQ9HB71 228 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 C3orf14Q9HBI5 128 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 A4GALTQ9NPC4 353 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 KRT84Q9NSB2 600 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 FAM118AQ9NWS6 357 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LYARQ9NX58 379 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 MS4A12Q9NXJ0 267 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 PTTG2Q9NZH5 202 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CALML5Q9NZT1 146 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 PDP1Q9P0J1 537 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 SPRR3Q9UBC9 169 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TRPC4Q9UBN4 977 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 RSL24D1Q9UHA3 163 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 KLHL21Q9UJP4 597 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MKLN1Q9UL63 735 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMCC3Q9ULS5 477 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 A4GNTQ9UNA3 340 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ANGPT4Q9Y264 503 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CARD8Q9Y2G2 431 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TDRKHQ9Y2W6 561 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 SAMHD1Q9Y3Z3 626 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 LSM4Q9Y4Z0 139 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 KLK4Q9Y5K2 254 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SNX5Q9Y5X3 404 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZNF780BQ9Y6R6 833 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SPACA6W5XKT8 324 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 TRGV5A0A0B4J1U4 118 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 A0A0G2JPF8 293 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PQ72 361 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 CCDC160A6NGH7 325 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 CBY3A6NI87 242 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 CD8B2A6NJW9 211 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 TTC36A6NLP5 189 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 SNTNA6NMZ2 147 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 HNRNPCL2B2RXH8 293 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 HNRNPCL3B7ZW38 293 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 G3V4G9 280 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 M0R3G1 203 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 PDLIM1O00151 329 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 UPK1AO00322 258 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 LDLRAD4O15165 306 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 NDUFS4O43181 175 aa2.8□□□□□ -1.96
SPG11-225ENST00000561391 TRMUO75648 421 aaKnown RBP2.8□□□□□ -1.96
SPG11-225ENST00000561391 LRATO95237 230 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms