RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 GFRA3O60609 400 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 RGS9O75916 674 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 HLA-DQA2P01906 255 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 KRT8P05787 483 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 ENPP1P22413 925 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 ENTPD1P49961 510 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 MEOX1P50221 254 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 PLGLB1Q02325 96 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 HIST3H3Q16695 136 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 RSPO4Q2I0M5 234 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 CREB3L2Q70SY1 520 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 DPY19L4Q7Z388 723 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 GALNTL5Q7Z4T8 443 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 SLC22A16Q86VW1 577 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 GLB1L2Q8IW92 636 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 ZFP62Q8NB50 900 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 SLC26A10Q8NG04 563 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 MCFD2Q8NI22 146 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 TRMT61AQ96FX7 289 aaKnown RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 TM9SF2Q99805 663 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 TTYH2Q9BSA4 534 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 TMED9Q9BVK6 235 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 KCNN2Q9H2S1 579 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 MRPL22Q9NWU5 206 aaKnown RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 COA3Q9Y2R0 106 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-206ENST00000561036 PMF1-BGLAPU3KQ54 211 aa15.27■□□□□ 0.04
HDDC3-206ENST00000561036 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 GABRPO00591 440 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 EIF1AYO14602 144 aaKnown RBP15.26■□□□□ 0.03
HDDC3-206ENST00000561036 GPRIN2O60269 458 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 RAMP1O60894 148 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 CEACAM4O75871 244 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 AQP8O94778 261 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 SERPINA3P01011 423 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF823P16415 610 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 CCL11P51671 97 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 CLDN20P56880 219 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 SLC17A1Q14916 467 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 CDK5R1Q15078 307 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 BCL2A1Q16548 175 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 PCK2Q16822 640 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF404Q494X3 552 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF766Q5HY98 468 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 C22orf42Q6IC83 251 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ARL9Q6T311 187 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 TMEM251Q8N6I4 163 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 OR9K2Q8NGE7 335 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 RPS4Y2Q8TD47 263 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 INTS12Q96CB8 462 aaKnown RBP15.26■□□□□ 0.03
HDDC3-206ENST00000561036 SMIM19Q96E16 107 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 EMC6Q9BV81 110 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ACKR4Q9NPB9 350 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 KLHDC2Q9Y2U9 406 aa15.26■□□□□ 0.03
HDDC3-206ENST00000561036 ZFHX2Q9C0A1 2572 aaPredicted RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ACOT7O00154 380 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 SMAD9O15198 467 aaKnown RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ABHD16AO95870 558 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 INHBBP09529 407 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 TNFSF10P50591 281 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF133P52736 654 aaPredicted RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ADAM8P78325 824 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ROM1Q03395 351 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 FMODQ06828 376 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 ETFDHQ16134 617 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 KCTD18Q6PI47 426 aaPredicted RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 SLC25A47Q6Q0C1 308 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 PAMR1Q6UXH9 720 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 WDFY1Q8IWB7 410 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 FDCSPQ8NFU4 85 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 OR6Q1Q8NGQ2 317 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 OR10D3Q8NH80 312 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 S100ZQ8WXG8 99 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 CPNE4Q96A23 557 aaPredicted RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 PNPLA2Q96AD5 504 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 UCN2Q96RP3 112 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 CDADC1Q9BWV3 514 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 SRXN1Q9BYN0 137 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 GALNT8Q9NY28 637 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 MRM2Q9UI43 246 aaKnown RBP15.25■□□□□ 0.03
HDDC3-206ENST00000561036 KCNG2Q9UJ96 466 aa15.25■□□□□ 0.03
HDDC3-206ENST00000561036 RIF1Q5UIP0 2472 aaKnown RBP15.24■□□□□ 0.03
HDDC3-206ENST00000561036 A0A075B6Q4 140 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 TMCC2O75069 709 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 GPANK1O95872 356 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 ACTL6AO96019 429 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 KLK2P20151 261 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 EDNRAP25101 427 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 LAP3P28838 519 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 RPS19P39019 145 aaKnown RBP15.24■□□□□ 0.03
HDDC3-206ENST00000561036 MAGEA5P43359 124 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 GDI2P50395 445 aaKnown RBP15.24■□□□□ 0.03
HDDC3-206ENST00000561036 LHX2P50458 406 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 RORCP51449 518 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 SUCLG1P53597 346 aaKnown RBP15.24■□□□□ 0.03
HDDC3-206ENST00000561036 CLDN17P56750 224 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 PPIAP62937 165 aaKnown RBP15.24■□□□□ 0.03
HDDC3-206ENST00000561036 CAMK2DQ13557 499 aa15.24■□□□□ 0.03
HDDC3-206ENST00000561036 DEFB109BQ30KR1 87 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms