RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 NAGAP17050 411 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 POLR2CP19387 275 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 CXCL3P19876 107 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CSRP1P21291 193 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZP3P21754 424 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DNASE1P24855 282 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CMPK1P30085 196 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LCN1P31025 176 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MPIP34949 423 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RBM34P42696 430 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 GDI2P50395 445 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 CCR9P51686 369 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GBX2P52951 348 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 PRKAG1P54619 331 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 KIAA1024LP59773 190 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 AP3S2P59780 193 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RAB8AP61006 207 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SRP54P61011 504 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPS15AP62244 130 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPS11P62280 158 aaKnown RBP eCLIP2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPS4XP62701 263 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 MRPS10P82664 201 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 PITPNAQ00169 270 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TGM3Q08188 693 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PUDPQ08623 228 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SNTA1Q13424 505 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MADCAM1Q13477 382 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CAMK2DQ13557 499 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FGL2Q14314 439 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IRF4Q15306 451 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR1Q1Q15612 314 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 HSPB2Q16082 182 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPE65Q16518 533 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 AANATQ16613 207 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DUSP5Q16690 384 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ST3GAL2Q16842 350 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ISXQ2M1V0 245 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 UAP1L1Q3KQV9 507 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SLC25A35Q3KQZ1 300 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LGALSLQ3ZCW2 172 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 AMZ1Q400G9 498 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 KLHL12Q53G59 568 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SMUG1Q53HV7 270 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SLC35D3Q5M8T2 416 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DCST2Q5T1A1 773 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZNF684Q5T5D7 378 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MRPL2Q5T653 305 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 METTL11BQ5VVY1 283 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C18orf63Q68DL7 685 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FAAH2Q6GMR7 532 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PLBD1Q6P4A8 553 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FAM199XQ6PEV8 388 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZCCHC12Q6PEW1 402 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ARL9Q6T311 187 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 B3GLCTQ6Y288 498 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RTL4Q6ZR62 310 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RRM2BQ7LG56 351 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SSX6Q7RTT6 188 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OVCH2Q7RTZ1 564 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 HMGN2P46Q86SG4 172 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GLRX5Q86SX6 157 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LUZP2Q86TE4 346 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GPAT4Q86UL3 456 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SLC51BQ86UW2 128 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 COMMD7Q86VX2 200 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 AMIGO1Q86WK6 493 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SIAH3Q8IW03 269 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TIGD4Q8IY51 512 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 UBE2J2Q8N2K1 259 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TOMM5Q8N4H5 51 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SPICQ8N5J4 248 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 C2orf73Q8N5S3 287 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 MS4A15Q8N5U1 240 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RFLNBQ8N5W9 214 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LSMEM1Q8N8F7 131 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 BMPERQ8N8U9 685 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZNF527Q8NB42 609 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 UXS1Q8NBZ7 420 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR11G2Q8NGC1 345 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR4D9Q8NGE8 314 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR8H1Q8NGG4 311 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR52E1Q8NGJ3 308 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR13C5Q8NGS8 318 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR13C2Q8NGS9 318 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR2T4Q8NH00 348 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR5W2Q8NH69 310 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR14A16Q8NHC5 309 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PFN4Q8NHR9 129 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RPLP0P6Q8NHW5 317 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FLVCR1-AS1Q8TAF5 88 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 LGALS14Q8TCE9 139 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 WIPF2Q8TF74 440 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 TMEM239Q8WW34 195 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IGFBPL1Q8WX77 278 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SMPDL3BQ92485 455 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RGP1Q92546 391 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 PHYHIPQ92561 330 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 NSMAFQ92636 917 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RSC1A1Q92681 617 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 CDS1Q92903 461 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms