RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 COL6A6A6NMZ7 2263 aa4.62□□□□□ -1.67
SPG11-220ENST00000559933 A0A1W2PRG6 482 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 OR6C68A6NDL8 312 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CCDC182A6NF36 153 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TVP23AA6NH52 213 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 M0R3G1 203 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 PRRG2O14669 202 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ARHGEF9O43307 516 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TLX2O43763 284 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 XPNPEP2O43895 674 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CYTIPO60759 359 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SLC19A2O60779 497 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ENTPD6O75354 484 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 WBP4O75554 376 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 UPK3AO75631 287 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TRMUO75648 421 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 C1QL1O75973 258 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 RCBTB2O95199 551 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 OR6A2O95222 327 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SYNGR4O95473 234 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SCG5P05408 212 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CD14P08571 375 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 DBHP09172 617 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CPN1P15169 458 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CTLA4P16410 223 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CDH2P19022 906 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 MYF6P23409 242 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SDHAP31040 664 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CDAP32320 146 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 GRK5P34947 590 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 RPS27P42677 84 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 PCYT1AP49585 367 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SMSP52788 366 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 PRPS1P60891 318 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 RPS3AP61247 264 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 RPL27P61353 136 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 CSNK2A1P68400 391 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 RASGEF1BQ0VAM2 473 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 COX10Q12887 443 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 KEAP1Q14145 624 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 MAD2L1BPQ15013 274 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 PDK3Q15120 406 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TSC22D1Q15714 1073 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SNAPC1Q16533 368 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 MEP1BQ16820 701 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ARMC4Q5T2S8 1044 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 C1orf185Q5T7R7 199 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 WLSQ5T9L3 541 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TMEM225Q6GV28 225 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 VWA1Q6PCB0 445 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 VHLLQ6RSH7 139 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 C5orf46Q6UWT4 87 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CASP12Q6UXS9 341 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 DPY19L2P2Q6ZN68 376 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CREB3L2Q70SY1 520 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 P4HA3Q7Z4N8 544 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ADGRE4PQ86SQ3 457 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 JAZF1Q86VZ6 243 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CPOQ8IVL8 374 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 UEVLDQ8IX04 471 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 C8orf59Q8N0T1 100 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 LNX2Q8N448 690 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 RFLNBQ8N5W9 214 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SCAIQ8N9R8 606 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ADPRHL1Q8NDY3 354 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 NOXO1Q8NFA2 376 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TMEM163Q8TC26 289 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 NSMAFQ92636 917 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 KISS1RQ969F8 398 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 PPP1R14AQ96A00 147 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 CPNE4Q96A23 557 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 SARAFQ96BY9 339 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 INTS12Q96CB8 462 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 ZHX1-C8orf76Q96EF9 292 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 LRR1Q96L50 414 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 OXGR1Q96P68 337 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ALKBH3Q96Q83 286 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 OR2M2Q96R28 347 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 NAA11Q9BSU3 229 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 PRRG4Q9BZD6 226 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 SYT4Q9H2B2 425 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 OR51V1Q9H2C8 321 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TXNIPQ9H3M7 391 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 RPRD1BQ9NQG5 326 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 CMC2Q9NRP2 79 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 PAK1IP1Q9NWT1 392 aaPredicted RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 IMPAD1Q9NX62 359 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TAS2R16Q9NYV7 291 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 GRHPRQ9UBQ7 328 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 PRSS50Q9UI38 385 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 MCTS1Q9ULC4 181 aaKnown RBP4.61□□□□□ -1.67
SPG11-220ENST00000559933 RAB26Q9ULW5 256 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 TRAPPC4Q9Y296 219 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 FLVCR1Q9Y5Y0 555 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 MED12LQ86YW9 2145 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 ALPK2Q86TB3 2170 aa4.61□□□□□ -1.67
SPG11-220ENST00000559933 DOCK7Q96N67 2140 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 NBASA2RRP1 2371 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TRGV8A0A0C4DH27 118 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SLC22A23A1A5C7 686 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms