RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 B4DSR2 109 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 MRASO14807 208 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 OR7A10O76100 309 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 TFP02787 698 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 MT-ND5P03915 603 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 PATE4P0C8F1 98 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 ACADSP16219 412 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 APLNRP35414 380 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 CRYBA2P53672 197 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 DVL1P1P54792 670 aaPredicted RBP10.53□□□□□ -0.72
SPG11-219ENST00000559822 UGT2B15P54855 530 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 TMEM33P57088 247 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
SPG11-219ENST00000559822 HSF2Q03933 536 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 TAF11Q15544 211 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 PCGF3Q3KNV8 242 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 ELFN2Q5R3F8 820 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 C10orf128Q5T292 105 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 UNQ6126/PRO20091Q6UXV3 157 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 TSPYL5Q86VY4 417 aaPredicted RBP10.53□□□□□ -0.72
SPG11-219ENST00000559822 RBM15BQ8NDT2 890 aaKnown RBP10.53□□□□□ -0.72
SPG11-219ENST00000559822 TMEM255BQ8WV15 326 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 LIPHQ8WWY8 451 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 ASB10Q8WXI3 467 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 C11orf40Q8WZ69 217 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 ZNF347Q96SE7 839 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 SEPHS2Q99611 448 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 SH3GL3Q99963 347 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 SOX7Q9BT81 388 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
SPG11-219ENST00000559822 SMURF2Q9HAU4 748 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 RIMS3Q9UJD0 308 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 FZR1Q9UM11 496 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 AP3M1Q9Y2T2 418 aa10.53□□□□□ -0.72
SPG11-219ENST00000559822 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 FXYD1O00168 92 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 HPXP02790 462 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 F13BP05160 661 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 LCKP06239 509 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 FAM157BP0CG42 384 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 LYNX1P0DP58 116 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SAGP10523 405 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 H2AFXP16104 143 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 TCN1P20061 433 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 IL2RGP31785 369 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 AQP2P41181 271 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 ZNF133P52736 654 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 ARFIP2P53365 341 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SEC24CP53992 1094 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 MRPS34P82930 218 aaKnown RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 TEKQ02763 1124 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 ST3GAL3Q11203 375 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 KLF10Q13118 480 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SCGB2A2Q13296 93 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 CCNIQ14094 377 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 MAD2L1BPQ15013 274 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 TRIP10Q15642 601 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 LRRC23Q53EV4 343 aaPredicted RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 TMEM154Q6P9G4 183 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 LRP11Q86VZ4 500 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 NKAIN4Q8IVV8 208 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 RFLNBQ8N5W9 214 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SYT14Q8NB59 555 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 PFN4Q8NHR9 129 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 FGFBP3Q8TAT2 258 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 ZNF519Q8TB69 540 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SYNPRQ8TBG9 265 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 FNDC8Q8TC99 324 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 C10orf82Q8WW14 230 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 LZICQ8WZA0 190 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 SIAEQ9HAT2 523 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 CCNB1IP1Q9NPC3 277 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 TAAR3PQ9P1P4 343 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 MYEF2Q9P2K5 600 aaKnown RBP10.52□□□□□ -0.73
SPG11-219ENST00000559822 CUBNO60494 3623 aa10.52□□□□□ -0.73
SPG11-219ENST00000559822 IGLV3-9A0A075B6K5 115 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 C17orf100A8MU93 164 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 FAM220BPB1ANY3 271 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 TRMUO75648 421 aaKnown RBP10.51□□□□□ -0.73
SPG11-219ENST00000559822 NAT2P11245 290 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 ZNF250P15622 560 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 TNFRSF1BP20333 461 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 DRD4P21917 467 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 GUCA1AP43080 201 aaPredicted RBP10.51□□□□□ -0.73
SPG11-219ENST00000559822 UCP2P55851 309 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 MYBPC1Q00872 1141 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 CD47Q08722 323 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 PIN1Q13526 163 aaPredicted RBP10.51□□□□□ -0.73
SPG11-219ENST00000559822 CYBRD1Q53TN4 286 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 ALG10Q5BKT4 473 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 FAM205BPQ63HN1 556 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 ARPINQ7Z6K5 226 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 C1orf174Q8IYL3 243 aa10.51□□□□□ -0.73
SPG11-219ENST00000559822 LRRC18Q8N456 261 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms