RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 A0A1B0GVI7 797 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 PRSS37A4D1T9 235 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 LEUTXA8MZ59 168 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ALG1L2C9J202 215 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ACOT7O00154 380 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SLC22A5O76082 557 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 MPC2O95563 127 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 HLA-DOBP13765 273 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 P2RX3P56373 397 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 AP3S2P59780 193 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 HSD11B2P80365 405 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 RPL6Q02878 288 aaKnown RBP9.05□□□□□ -0.96
LRRC28-216ENST00000559819 BIKQ13323 160 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SLC17A1Q14916 467 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 POU4F3Q15319 338 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 OR7E24Q6IFN5 339 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 OGFOD3Q6PK18 319 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ADGRG3Q86Y34 549 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 WDFY1Q8IWB7 410 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 OR4D10Q8NGI6 311 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF519Q8TB69 540 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 NXPE2Q96DL1 559 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 OR8B4Q96RC9 309 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 DPYSL5Q9BPU6 564 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 C12orf10Q9HB07 376 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 CTSFQ9UBX1 484 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 EPHA6Q9UF33 1036 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SCP2D1Q9UJQ7 156 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ETV7Q9Y603 341 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 PCNX3Q9H6A9 2034 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 CACNA1CQ13936 2221 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ASXL3Q9C0F0 2248 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 NAP1L6A6NFF2 107 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 TNFRSF10AO00220 468 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SULT1B1O43704 296 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 OR6A2O95222 327 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 TGM6O95932 706 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 PGCP20142 388 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 NXPH1P58417 271 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 RPL27P61353 136 aaKnown RBP9.05□□□□□ -0.96
LRRC28-216ENST00000559819 UBXN2BQ14CS0 331 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ELFN2Q5R3F8 820 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SEZ6L2Q6UXD5 910 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 FAM109AQ8N4B1 249 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 FTMTQ8N4E7 242 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 DUSP19Q8WTR2 217 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SORCS2Q96PQ0 1159 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-216ENST00000559819 FOXQ1Q9C009 403 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 NPTNQ9Y639 398 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 TMEM14AQ9Y6G1 99 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 SEC16AO15027 2179 aa9.05□□□□□ -0.96
LRRC28-216ENST00000559819 IGLV1-36A0A0B4J1U3 117 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 A0A1B0GUH1 482 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 EIF4E2O60573 245 aaKnown RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 ITGA5P08648 1049 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 HNRNPKP61978 463 aaKnown RBP eCLIP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 ADAM8P78325 824 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 C19orf57Q0VDD7 668 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 SQSTM1Q13501 440 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 SGCBQ16585 318 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PCGF3Q3KNV8 242 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 C1orf140Q5VVS0 124 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 GLDNQ6ZMI3 551 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 SLC29A4Q7RTT9 530 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 SDR16C5Q8N3Y7 309 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 OR1N1Q8NGS0 311 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 GPR119Q8TDV5 335 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 THAP3Q8WTV1 239 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PMEPA1Q969W9 287 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 DUSP15Q9H1R2 295 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 COPS7AQ9UBW8 275 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 SDK1Q7Z5N4 2213 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PYCARD-AS1I3L0S3 204 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF354AO60765 605 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 CTAG2O75638 210 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PIAS2O75928 621 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 VSIG10L2P0DP72 767 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 ENPP1P22413 925 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 LCN1P31025 176 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 POU3F4P49335 361 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 POLR2HP52434 150 aaKnown RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 UBE2MP61081 183 aaKnown RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 TSPAN5P62079 268 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 RASGEF1BQ0VAM2 473 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 EIF2B1Q14232 305 aaKnown RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 CSRP2Q16527 193 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 NHLRC1Q6VVB1 395 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms