RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 INHBBP09529 407 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 OR4A8P0C604 315 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MAKP20794 623 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 SDHAP31040 664 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 APLNRP35414 380 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CDKN1AP38936 164 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 RAD52P43351 418 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GPR4P46093 362 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GIPRP48546 466 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 RPS6KA3P51812 740 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 DSCR9P59020 149 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MRPS34P82930 218 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 VLDLRP98155 873 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MYBPC1Q00872 1141 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 HSF2Q03933 536 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 RUNX1T1Q06455 604 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 DAG1Q14118 895 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TRIM25Q14258 630 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 SGCAQ16586 387 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 FXNQ16595 210 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 HIST3H3Q16695 136 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CLEC12BQ2HXU8 276 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 DNAL1Q4LDG9 190 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 PHYHD1Q5SRE7 291 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ARMC4Q5T2S8 1044 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GPR139Q6DWJ6 353 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TMEM53Q6P2H8 277 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 PODNL1Q6PEZ8 512 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 LRFN4Q6PJG9 635 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 VHLLQ6RSH7 139 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TBPL2Q6SJ96 375 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ARL9Q6T311 187 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CLEC2AQ6UVW9 174 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 NHLRC1Q6VVB1 395 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CYP2R1Q6VVX0 501 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 DPY19L2P2Q6ZN68 376 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ADCK1Q86TW2 530 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MDP1Q86V88 176 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ZDHHC21Q8IVQ6 265 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 C1orf174Q8IYL3 243 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 LRRC18Q8N456 261 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 LINC00471Q8N535 108 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ARIH2OSQ8N7S6 290 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 OR4K5Q8NGD3 323 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 OR52L1Q8NGH7 329 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 OR13C2Q8NGS9 318 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MOSPD2Q8NHP6 518 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 IGFBPL1Q8WX77 278 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ASB10Q8WXI3 467 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 NSMAFQ92636 917 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CCDC124Q96CT7 223 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 C7orf34Q96L11 122 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TNFRSF13CQ96RJ3 184 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 SEPHS2Q99611 448 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 SH3GL3Q99963 347 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 VRK1Q99986 396 aaPredicted RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 RHNO1Q9BSD3 238 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 THTPAQ9BU02 230 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TRAF4Q9BUZ4 470 aaPredicted RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 ALG12Q9BV10 488 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CACNG6Q9BXT2 260 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MRPL13Q9BYD1 178 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 RAB1BQ9H0U4 201 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 NELFAQ9H3P2 528 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 PLK3Q9H4B4 646 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ZNF442Q9H7R0 627 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 SEC61A2Q9H9S3 476 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 SIAEQ9HAT2 523 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 NOX3Q9HBY0 568 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 MYOZ1Q9NP98 299 aaPredicted RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 MAN2C1Q9NTJ4 1040 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TMEM38BQ9NVV0 291 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GMPR2Q9P2T1 348 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 EIF3KQ9UBQ5 218 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 SLC7A8Q9UHI5 535 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GPR160Q9UJ42 338 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ZNF346Q9UL40 294 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 SIGLEC7Q9Y286 467 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CMAHPQ9Y471 501 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 FKBP7Q9Y680 259 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 ITPR3Q14573 2671 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CADP27708 2225 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 USF3Q68DE3 2245 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MTORP42345 2549 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MAP1AP78559 2803 aaPredicted RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 IGHV2OR16-5A0A0B4J2B6 119 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TRBV4-1A0A0J9YWV2 114 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 A0A1W2PPL8 197 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SH3PXD2BA1X283 911 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 PRSS37A4D1T9 235 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 UNC119BA6NIH7 251 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 C12orf71A8MTZ7 269 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 H7C1Q1 480 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TNFRSF11BO00300 401 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 GNGT2O14610 69 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CDC42EP2O14613 210 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SMAD7O15105 426 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms