RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ARNTLO00327 626 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 TACR3P29371 465 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SNCAP37840 140 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 MTNR1BP49286 362 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 RANBP10Q6VN20 620 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 NPSR1Q6W5P4 371 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ZNF480Q8WV37 535 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SLC7A6Q92536 515 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 TMEM212A6NML5 194 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 IGHG1P01857 330 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 GJA4P35212 333 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 OPRD1P41143 372 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 GLYATL3Q5SZD4 288 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 C1orf198Q9H425 327 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 C3P01024 1663 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
SPG11-210ENST00000558319 TAF9Q16594 264 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 TMED6Q8WW62 240 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
SPG11-210ENST00000558319 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SELENOFO60613 162 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ZFAND5O76080 213 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 L3MBTL4Q8NA19 623 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 SLC22A12Q96S37 553 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
SPG11-210ENST00000558319 ZNF587BE7ETH6 402 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 CNIH1O95406 144 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 NQO2P16083 231 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 NDUFB7P17568 137 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 RAD52P43351 418 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 CD276Q5ZPR3 534 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 YRDCQ86U90 279 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 C19orf47Q8N9M1 422 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 HAVCR2Q8TDQ0 301 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 ASB17Q8WXJ9 295 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 THOC3Q96J01 351 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 ACSS1Q9NUB1 689 aaPredicted RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 WIF1Q9Y5W5 379 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 KPTNQ9Y664 436 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 A3GALT2U3KPV4 340 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 EIF3FO00303 357 aaPredicted RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 SOX15O60248 233 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 C1QBP02746 253 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 F11P03951 625 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 SEMG1P04279 462 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 ZNF90Q03938 601 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 TSPAN31Q12999 210 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 COX20Q5RI15 118 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 WBP2NLQ6ICG8 309 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 TMEM255BQ8WV15 326 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 WDR83Q9BRX9 315 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 SRRQ9GZT4 340 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 WDR76Q9H967 626 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 FLVCR2Q9UPI3 526 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 PMS2P2O95744 297 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 SRMP19623 302 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 ZNF684Q5T5D7 378 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 RPL7L1Q6DKI1 246 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 AAED1Q7RTV5 226 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 C11orf42Q8N5U0 333 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 OR4N2Q8NGD1 307 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 TANKQ92844 425 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 ACHEP22303 614 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 MORN1Q5T089 497 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 CLDN22Q8N7P3 220 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 EMC6Q9BV81 110 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 NFAT5O94916 1531 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 H2AFB1P0C5Y9 115 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 SSR4P51571 173 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 SYT13Q7L8C5 426 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 MRPL43Q8N983 215 aaKnown RBP12.86□□□□□ -0.35
SPG11-210ENST00000558319 OR4F5Q8NH21 305 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 OR5B3Q8NH48 314 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 RASD2Q96D21 266 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 OR4F4Q96R69 305 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 ATF6BQ99941 703 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 BANF2Q9H503 90 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 CRLF2Q9HC73 371 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
SPG11-210ENST00000558319 PAPLNO95428 1278 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms