RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SLC25A47Q6Q0C1 308 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 B3GLCTQ6Y288 498 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 ANKRD46Q86W74 232 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 EIF1ADQ8N9N8 165 aaKnown RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 LINC01555Q8NAE3 123 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 STEAP2Q8NFT2 490 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 OR52B4Q8NGK2 314 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 OR5AR1Q8NGP9 310 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 OR13C2Q8NGS9 318 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 VANGL1Q8TAA9 524 aaPredicted RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 ANP32BQ92688 251 aaKnown RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 TFGQ92734 400 aaPredicted RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 C1orf147Q96MC9 270 aaPredicted RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 RASL10BQ96S79 203 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 SPAG8Q99932 426 aaPredicted RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 LRRC40Q9H9A6 602 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 UGT1A10Q9HAW8 530 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 QPCTLQ9NXS2 382 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 RWDD2AQ9UIY3 292 aa4.68□□□□□ -1.66
RTF1-204ENST00000558117 YARS2Q9Y2Z4 477 aaKnown RBP4.68□□□□□ -1.66
RTF1-204ENST00000558117 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 KRTAP16-1A8MUX0 517 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 H0YGG7 62 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 H7C417 338 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 TGM6O95932 706 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 CCL3P10147 92 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 OR3A1P47881 315 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 DDX39BQ13838 428 aaKnown RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 RCAN2Q14206 197 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 PIGHQ14442 188 aaPredicted RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 PHKG1Q16816 387 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 HKDC1Q2TB90 917 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 ZCWPW2Q504Y3 356 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 C2CD6Q53TS8 623 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 DMRTC1Q5HYR2 192 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 LDLRAP1Q5SW96 308 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 LCN1P1Q5VSP4 162 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 PRAMEF7Q5VXH5 474 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 LRRC8BQ6P9F7 803 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 Q6ZRP5 223 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 CDKL3Q8IVW4 592 aaPredicted RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 LAX1Q8IWV1 398 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 KIR3DL3Q8N743 410 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 APCDD1LQ8NCL9 501 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 KCTD4Q8WVF5 259 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 SLC35C1Q96A29 364 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 PGM2Q96G03 612 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 DHTKD1Q96HY7 919 aaPredicted RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 PCDHB18PQ96TA0 734 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 B9D2Q9BPU9 175 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 BPIFA3Q9BQP9 254 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 ZNF416Q9BWM5 594 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 UGT2B28Q9BY64 529 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 BPESC1Q9GZL8 116 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 COG4Q9H9E3 785 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 NTN4Q9HB63 628 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 CRLF2Q9HC73 371 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 NT5MQ9NPB1 228 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 IL26Q9NPH9 171 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 GLRX2Q9NS18 164 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 MAN2C1Q9NTJ4 1040 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 ZCCHC3Q9NUD5 404 aaKnown RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 FAIMQ9NVQ4 179 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 CLCF1Q9UBD9 225 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 PCSK1NQ9UHG2 260 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 ZNF223Q9UK11 482 aaPredicted RBP4.67□□□□□ -1.66
RTF1-204ENST00000558117 KLK4Q9Y5K2 254 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 U3KQK5 164 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 MED12LQ86YW9 2145 aa4.67□□□□□ -1.66
RTF1-204ENST00000558117 NCKAP5O14513 1909 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 A0A087X0K7 114 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 A0A1B0GUS0 222 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 C5orf63A6NC05 138 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SAGE2PA6NJ88 616 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 OR2J2O76002 312 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 TACSTD2P09758 323 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 PIRTP0C851 137 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 EZRP15311 586 aaKnown RBP4.66□□□□□ -1.66
RTF1-204ENST00000558117 OMGP23515 440 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 PIK3R1P27986 724 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SDC4P31431 198 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SOX3P41225 446 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 XCR1P46094 333 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 TPI1P60174 286 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 KRT31Q15323 416 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SLC1A5Q15758 541 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 MARC1Q5VT66 337 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 RTL4Q6ZR62 310 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 GTSCR1Q86UQ5 136 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 BBS5Q8N3I7 341 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 BPIFB2Q8N4F0 458 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 TEX26Q8N6G2 289 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 KLHDC1Q8N7A1 406 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 MINDY2Q8NBR6 621 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 OR51Q1Q8NH59 317 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 DTX3LQ8TDB6 740 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 FAM172AQ8WUF8 416 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms